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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.15G027400.1.p |
Common Name | GLYMA_15G027400, LOC100803893 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
NF-YA |
Protein Properties |
Length: 298aa MW: 33200.2 Da PI: 8.6395 |
Description |
NF-YA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.15G027400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | CBFB_NFYA | 98.2 | 8.8e-31 | 177 | 233 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
+ep+YVN+KQy++Il+RRq Rakle+ +k +k rkpylheSRh+hAl+R+Rg gGrF
Glyma.15G027400.1.p 177 EEPIYVNSKQYHAILRRRQYRAKLEALNKP-IKDRKPYLHESRHQHALKRARGAGGRF 233
69***************************9.**************************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0016602 | Cellular Component | CCAAT-binding factor complex |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MNCLCEKDSG LFSSHSTAPY VLGCPSWATS EFEVQRSSMS RSLSSKVDVL PQQCHNSKTF 60 NFQFQEQDAS STKSTDQSYP EVGTVQSGQI SVQHSSTDST LIRNEGKSMG CVIRSFMGSQ 120 DFPFPPPLLD HRPILAHIAC HYADPCYSGL VAAAYSPQSK PVETAPVRIP LQLDFAEEPI 180 YVNSKQYHAI LRRRQYRAKL EALNKPIKDR KPYLHESRHQ HALKRARGAG GRFLNTKKQL 240 QSNHTPGNIA ESKMHHIENY RDGADVSYAF NSDARNMQND AADKGGGTTQ QPLFVYM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235312 | 1e-145 | AC235312.1 Glycine max strain Williams 82 clone GM_WBb0071J06, complete sequence. |
GenBank | EU028314 | 1e-145 | EU028314.1 Glycine max clone BAC gmw1-6b18 genomic sequence. |
GenBank | EU028315 | 1e-145 | EU028315.1 Glycine max clone BAC gmw1-9c4 genomic sequence. |