PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.14G204100.1.p | ||||||||
Common Name | GLYMA_14G204100, LOC778172 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | bZIP | ||||||||
Protein Properties | Length: 363aa MW: 39059.3 Da PI: 6.6581 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.3 | 2.1e-10 | 164 | 216 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l ++ Glyma.14G204100.1.p 164 KRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTT 216 9*****************************************99988876655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.3E-16 | 160 | 224 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.749 | 162 | 225 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.3E-9 | 164 | 219 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 5.1E-10 | 164 | 218 | No hit | No description |
SuperFamily | SSF57959 | 7.03E-11 | 164 | 215 | No hit | No description |
CDD | cd14703 | 4.21E-24 | 165 | 214 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 363 aa Download sequence Send to blast |
MQDPSSNPNS NPNPNPHNAN AASQLPRPPP ATTAGAGASS SSLFARSGGP HHRRAHSEVS 60 FRLPDDMMDL SPSDPFAGGS STASMEEIGS EDDLFSTYID VDKLGGANGS GASGNGADPT 120 GETEKSPARP RHRHSSSVDF GEIMDAKKAM PPDKLAELWT IDPKRAKRIL ANRQSAARSK 180 ERKARYIQEL ERKVQTLQTE ATTLSAQLTL YQRDTTGLST ENTELKLRLQ AMEQQAQLRD 240 ALNEALKKEV ERLKVATGEM MSHTDSFNLG MHLMPFSGSN FVPIPPQSGP SGHQNMQMPP 300 FGLTPSTMPS HLLHQTSSHP YSEILQNDQL GRFQGLDISS KGSTLVKSEG PSLSASESST 360 TF* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Gma.30030 | 0.0 | cotyledon |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Ubiquitous. Strongly expressed in mature pollen. {ECO:0000269|PubMed:27896439}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.14G204100.1.p |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015036 | 1e-132 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003544931.1 | 0.0 | transcription factor RF2b | ||||
Swissprot | O22873 | 1e-103 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | I1MBK7 | 0.0 | I1MBK7_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G38460.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1548 | 34 | 97 | Representative plant | OGRP126 | 17 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06850.1 | 4e-86 | basic leucine-zipper 52 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.14G204100.1.p |
Entrez Gene | 778172 |