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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G094800.1.p |
Common Name | GLYMA_14G094800, LOC100780326 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GATA |
Protein Properties |
Length: 307aa MW: 34349.6 Da PI: 9.9482 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G094800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.2 | 9.4e-18 | 170 | 203 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+t++TplWR gp g+k+LCnaCG+++rk +
Glyma.14G094800.1.p 170 CSDCNTSTTPLWRTGPKGPKSLCNACGIRQRKAR 203
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0030154 | Biological Process | cell differentiation |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
GO:0001085 | Molecular Function | RNA polymerase II transcription factor binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MTPYSLNPPG PSIQAGQNQL FNISPNNQDC RTFFNIFDPR QTSIEIGGLR ENYRQDDKMI 60 LHDGSSSNCN SSFNISPETV VMVDPLSSAC DRRNLPSEEE SKNNDHGSGN KWMSSKMRLM 120 KKMMRPSISP TTDKAINSSP RFQNHQGLES RRYSQRSPRN NNGSSTPRVC SDCNTSTTPL 180 WRTGPKGPKS LCNACGIRQR KARRAMAEAA NGLVTPIACE KTRLHNKEKK SRMNHFAQFK 240 NKYKSTTTTT TTTVGSSEGV RKLEYFNNFA ISLRSNNSDF EQMFPRDEVA EAALLLMDLS 300 CGFVHL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 1e-79 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |