PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.14G084200.3.p
Common NameGLYMA_14G084200, LOC100785332
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 297aa    MW: 32498.3 Da    PI: 8.3007
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.14G084200.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.34.3e-16128174455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  Glyma.14G084200.3.p 128 FHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 174
                          5*************************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.102.5E-20121184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-20121184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.765124173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.05E-18127178No hitNo description
PfamPF000101.6E-13128174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-18130179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MAGDIGRALP PPDSEEFSTL FNQLLHNSPP LGMDPNHSPS DFTPHNTTIN INSNNNNNTV  60
PSSPSNFNFS DPHHYIPASD ATTFKQHNIN HNNNHTPDFT SSHVESVEAS KPVPPPRSSS  120
KRSRAAEFHN LSEKRRRSRI NEKMKALQNL IPNSNKTDKA SMLDEAIEYL KQLQLQVQML  180
MMRNGLSLHP MSLPGGLRPM IMPQTGLNLD GSNGFQNSTC AIASSSNDES LVRHAFSFPK  240
QCSISNKSIG VPSVKNIATS DTSSTFHPSI KDALYGNMPQ PFMDTTKIGK PSPDVS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.14G084200.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT1477273e-98BT147727.1 Lotus japonicus clone JCVI-FLLj-8F4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014622038.10.0transcription factor ALC isoform X2
RefseqXP_028199951.10.0transcription factor ALC-like isoform X2
TrEMBLK7M5M70.0K7M5M7_SOYBN; Uncharacterized protein
STRINGGLYMA14G09231.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.15e-27bHLH family protein