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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G069700.1.p |
Common Name | GLYMA_14G069700, Glyma14g07590.1, LOC106795957 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 294aa MW: 32482.2 Da PI: 6.2547 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G069700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30.1 | 8.5e-10 | 215 | 256 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++RR+ri +++ L+el+P+ K++ +++LekA+ Y+k Lq
Glyma.14G069700.1.p 215 AKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 256
69*******************5.....5******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MALSLTSNGV NEYQKCVVEE EDGSQSTNGL SNDSASAITN SPPLCGNEYV HKSTHYQLEE 60 AESLINFKAN DQYNNLMQGS ESFLSFQQSW MFSKESNLHE GYNQWNHVIS PKSPTDMRLV 120 QNFSCFETAT GYSSIFNGAK DKQHGESSSS GWLYSEPNVP SDSLHESAAQ ELVLKKRSFM 180 GENMQVTNAK KPCTSASKAA KPKSNPSQDP QSVAAKNRRE RISERLKILQ ELVPNGSKVD 240 LVTMLEKAIS YVKFLQLQVK VLAADEFWPV QGGKAPDISQ VRQAIDAILS SQR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031123 | 0.0 | KT031123.1 Glycine max clone HN_CCL_81 bHLH transcription factor (Glyma14g07590.1) mRNA, partial cds. |
Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281] - Chai C, et al.
Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance. BMC Genomics, 2015. 16: p. 596 [PMID:26268547] - Kim CM,Dolan L
ROOT HAIR DEFECTIVE SIX-LIKE Class I Genes Promote Root Hair Development in the Grass Brachypodium distachyon. PLoS Genet., 2016. 12(8): p. e1006211 [PMID:27494519] - Feng Y, et al.
Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839 [PMID:29233944]
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