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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.14G062200.2.p |
Common Name | GLYMA_14G062200, MYB75 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
MYB |
Protein Properties |
Length: 307aa MW: 34844.2 Da PI: 7.655 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.14G062200.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 22.2 | 3.2e-07 | 26 | 71 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
WT e+ +++ a + + ++ +W ++a++++ g+t +++ ++
Glyma.14G062200.2.p 26 EWTREDNKKFESALAIYDNDtpdRWFKVAAMIP-GKTVFDVIKQYRE 71
7********************************.****999999875 PP
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2 | Myb_DNA-binding | 40.4 | 6.7e-13 | 126 | 170 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT++E+ +++ + ++G+g+W+ I+r + ++t+ q+ s+ qky
Glyma.14G062200.2.p 126 PWTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKY 170
8*******************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MELETIYPPC FMPNSNWFVQ ESHSTEWTRE DNKKFESALA IYDNDTPDRW FKVAAMIPGK 60 TVFDVIKQYR ELEEDVSEIE AGRVPIPGYL ASSFTFELVD NHNYDGCRRR LAPVRGSDQE 120 RKKGVPWTED EHRRFLMGLL KYGKGDWRNI SRNFVVTKTP TQVASHAQKY YIRQKVSGGK 180 DKRRPSIHDI TTVNLTETSA SDKNKPQLFN ASPVLAPQQK LNSISKVQLG WTSSHYNDGS 240 FMVFNPNSDA LFVSSSPDVT SMALKMQGQD LYDCALHEAY AKVKVPGFSM APRDFNNEAV 300 FGIHAL*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.27360 | 0.0 | cotyledon| epicotyl| flower| hypocotyl| leaf| root| seed coat| somatic embryo| stem |
Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Detected in the apical inflorescence meristem, in bract primordia arising in its periphery and in floral meristems produced in the axils of bracts (stages 0-3). From stage 3 to stage 8, detected in all floral organs irrespective of their dorsoventral positions. From stage 9, barely detectable in bracts, sepals, and stamens. In the corolla, however, expression was maintained and enhanced in some regions. Within ventral and lateral petals at stage 9, asymmetric pattern of expression with high levels of transcripts in the inner epidermis of the furrow and very reduced levels in the remaining cell layers. In the dorsal petals, from stage 9 onward, detected but with a more even distribution across cell layers than in the ventral petal. {ECO:0000269|PubMed:11937495}. |
Functional Description ? help
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Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 1e-158 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |