 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.13G359800.2.p |
Common Name | GLYMA_13G359800 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
Trihelix |
Protein Properties |
Length: 358aa MW: 40895.9 Da PI: 4.4835 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G359800.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 43 | 1.2e-13 | 127 | 211 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
Wt++e+ +L++a ++ + +r++l+ W++++k + + ++er+ +qC+++++ l+k+ykk+k+ + ++ +++yf++++
Glyma.13G359800.2.p 127 WTERETFVLLDAWGDRFLQHGRKSLRCEEWQQIAKMVsQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDS-DGGACKWVYFKSMD 211
*************************************555789**************************95.78888********8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MALRMMQDDN DENEEHVQLE GEDEVDVDQS NNLQLPQKDD DEEDGMDGGG DENDDDEEEE 60 AEENKQIDYY PTKSDEDEVE WHPKKQKLKS LISTYELAPR VPAPSVAATA PSVPKPSSGG 120 RNSLTDWTER ETFVLLDAWG DRFLQHGRKS LRCEEWQQIA KMVSQVSKIE RTDTQCRNRL 180 DTLKKKYKKE KAKFPDSDGG ACKWVYFKSM DELMASPPQQ AGLSCGVDSG EYVFMNPRVH 240 LNHANGLDEM RDSPDNTEST GEEGSDGPQA KKRKKRRGSG EASSFRLLAD SIQKFSKIYE 300 KIENSKRQQM VELEKMRMDF HKELETQKRQ ILENLRCEIS KLEQRNDDND DSAENGT*
|
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 270 | 274 | KKRKK |
2 | 270 | 276 | KKRKKRR |