PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G359800.1.p
Common NameGLYMA_13G359800, LOC100814194
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 385aa    MW: 43887.9 Da    PI: 4.3663
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G359800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.81.4e-13154238286
             trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                          Wt++e+ +L++a  ++  + +r++l+   W++++k + +  ++er+ +qC+++++ l+k+ykk+k+   +  ++   +++yf++++
  Glyma.13G359800.1.p 154 WTERETFVLLDAWGDRFLQHGRKSLRCEEWQQIAKMVsQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDS-DGGACKWVYFKSMD 238
                          *************************************555789**************************95.78888********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.9E-5113122IPR009057Homeodomain-like
PfamPF138372.6E-20153240No hitNo description
PROSITE profilePS500906.202154211IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.602.9E-5179218IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MDGIEDDARY PPNPYGYGYQ NSLYSPPVDT EYALDDNDEN EEHVQLEGED EVDVDQSNNL  60
QLPQKDDDEE DGMDGGGDEN DDDEEEEAEE NKQIDYYPTK SDEDEVEWHP KKQKLKSLIS  120
TYELAPRVPA PSVAATAPSV PKPSSGGRNS LTDWTERETF VLLDAWGDRF LQHGRKSLRC  180
EEWQQIAKMV SQVSKIERTD TQCRNRLDTL KKKYKKEKAK FPDSDGGACK WVYFKSMDEL  240
MASPPQQAGL SCGVDSGEYV FMNPRVHLNH ANGLDEMRDS PDNTESTGEE GSDGPQAKKR  300
KKRRGSGEAS SFRLLADSIQ KFSKIYEKIE NSKRQQMVEL EKMRMDFHKE LETQKRQILE  360
NLRCEISKLE QRNDDNDDSA ENGT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1297301KKRKK
2297303KKRKKRR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.594720.0seed coat
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G359800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003543648.10.0trihelix transcription factor ASIL1
TrEMBLK7M3V10.0K7M3V1_SOYBN; Uncharacterized protein
STRINGGLYMA13G43651.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Representative plantOGRP4871684
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.11e-63Trihelix family protein