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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.13G337400.2.p |
| Common Name | GLYMA_13G337400 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 588aa MW: 65212.4 Da PI: 5.3096 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G337400.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 212.9 | 1.7e-65 | 368 | 574 | 1 | 207 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
l++lL+ cA+avss+d++ a++lL+++++++s gd+ qRla+y+++AL+arl++ ++++ ++ + ++ ++++ l a+++f ++P+
Glyma.13G337400.2.p 368 LRTLLILCAQAVSSSDNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVG--DGTATQIFYMSYKKFTTTDFLRAYQVFISACPF 455
5789**************************************************9..555444544444445699*************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
kf+h+ aN++I++ ++g+e++HiiDf+i +G+QWp L++ L+ Rp+gpp+lRiTg++ p++g +e++eetg+rLak++++++vpfe+
Glyma.13G337400.2.p 456 KKFAHFFANKMIMKTADGAETLHIIDFGILYGFQWPILIKFLSRRPGGPPKLRITGIEYPQPGfrPTERIEETGRRLAKYCKRFNVPFEY 545
**************************************************************9*************************** PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlv 207
++++++++e++++e+L+++++E laVn+
Glyma.13G337400.2.p 546 KAIASRNWETIQIEDLKIERNELLAVNCL 574
**9999**********************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 588 aa
Download sequence Send
to blast |
MLVFSFPPYA LVLFHISLAS MDPNFIISGY DFDESNHWDL NGHYANLLND AFSDVGPLGL 60
SQNAILNSEP FVSSSGSAAT DPAATTATLA DPSPEEDTDF SETFKFISQI LLEENFEQKP 120
CMCYDPLTLQ HTEKSFYEAL ELEPSLPLSP NQHPLESPDG NSSNSISDSA NSHDLKPSSP 180
NTPVSDALHS SSHAPSFVVP PHALNKINDG TVDLDSSVTK LLAENIFSDT DSMLQFKRGL 240
EEASKFLPRR PQLFTGLEST AVSAEPKGKG VALKMENSIG VRSRKNHARQ DEEEEEERSN 300
KQSAVSAVCV EEESEISEIF DRVLLSVENV PLCAEKNGSV AQAEKSNLSD GGKVRSKRQG 360
RKKETVDLRT LLILCAQAVS SSDNRTANEL LKQIRQHSSA LGDASQRLAH YVANALEARL 420
VGDGTATQIF YMSYKKFTTT DFLRAYQVFI SACPFKKFAH FFANKMIMKT ADGAETLHII 480
DFGILYGFQW PILIKFLSRR PGGPPKLRIT GIEYPQPGFR PTERIEETGR RLAKYCKRFN 540
VPFEYKAIAS RNWETIQIED LKIERNELLA VNCLGGTVPL FFNLRYV*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, shoots, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
