 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.13G325100.1.p |
Common Name | GLYMA_13G325100, LOC100813303 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
Family |
GATA |
Protein Properties |
Length: 328aa MW: 36058.5 Da PI: 8.6597 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G325100.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 60.3 | 2.4e-19 | 241 | 274 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
Glyma.13G325100.1.p 241 CMHCEVTKTPQWREGPVGPKTLCNACGVRYRSGR 274
99*****************************987 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0030154 | Biological Process | cell differentiation |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
GO:0001085 | Molecular Function | RNA polymerase II transcription factor binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MSKDIANMKD SWFFDNNFNG LSDEIFDDVI NFFDFPLEDV EANGVEEDWD AQLKCLEDPR 60 VDVYTASSAG LCAKTQNEKP QLGMKFSASG NGISPIKQLG KATGPVYGKT ITHQNVTSNG 120 KDLHQFQTYT YSPVSVFESS SSSSVENSNF DRPVIPVKRA RSKRQRPSSF SPLFSIPFIL 180 NSPAMQNHQR IAAADSDFGT NVAGNLSNKL KKQKKKDSSL LSDDVEMMRS SSPESGSPRK 240 CMHCEVTKTP QWREGPVGPK TLCNACGVRY RSGRLFPEYR PAASPTFVAS LHSNCHKKVV 300 EMRSRAIQEP VRGSMLASSN LHGNAVG*
|