PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.13G290100.2.p
Common NameGLYMA_13G290100
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family G2-like
Protein Properties Length: 370aa    MW: 41888.3 Da    PI: 8.4672
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.13G290100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.74.8e-3293146255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  Glyma.13G290100.2.p  93 PRLRWTPDLHLAFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 146
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.64889149IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.1E-3089147IPR009057Homeodomain-like
SuperFamilySSF466891.29E-1491147IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-2293148IPR006447Myb domain, plants
PfamPF002495.5E-994145IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MDETICVSEE DHHKSGSSSK PSSPTLRRKR SFFDLNEEAV DGGGDDSTSD DDGLMTSNGI  60
SSQEGNLSSN NSSSEEGKER ASTVRQYVRS KMPRLRWTPD LHLAFVHAVE RLGGQERATP  120
KLVLQLMNVK GLSIAHVKSH LQMYRSKKLD ESGQVLPHNR AMQGRHSIFD MYGRLNAPRH  180
FGNDNRNYLP SSLLLEQRPY ESGHGSSRLH PTALFNSHMI IRSSSGWDKD LYNYQYQRSF  240
CSPNFTGHAK FDAEAHDVKN RMPEFINQVQ IWKQGDIKDQ LERLNEKKGS PSFLELKLSQ  300
EYSRNVRDHQ MNKDSESEQE TNMRLSLSLF TSSSSSNSSQ LAQGSEKQKN NTRVESFCFQ  360
NNALRSHLG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-1894148357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1894148357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1894148357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1894148357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.13G290100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014621440.10.0putative two-component response regulator ARR21 isoform X2
TrEMBLK7M2I60.0K7M2I6_SOYBN; Uncharacterized protein
STRINGGLYMA13G36616.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-38G2-like family protein