PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 321aa MW: 35802.2 Da PI: 6.5181

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.13G272500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.1	3e-11	175	220	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Glyma.13G272500.1.p 175 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 220 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.2E-14	171	235	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.703	173	225	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.9E-14	175	226	No hit	No description
Pfam	PF00170	7.9E-10	175	220	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.29E-11	175	229	No hit	No description
CDD	cd14703	5.59E-22	176	226	No hit	No description
PROSITE pattern	PS00036	0	178	193	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence Send to blast
MAQLPPKIPT IPQNWPSFPH QRVPSMANFN PTTSTTTATT TPPPPSWVDE FLDFSSARRG 60 AHRRSASDSI TFLEAPFLDE CRAGFDRLDE DQLISMFSDD IAAASLPPPP PLSSASNPSS 120 PASDQNSSEE KPMEMALDVK PKAETLEEES SYKDEEAAPQ PSAIATCTET VVDPKRVKRI 180 LANRQSAQRS RVRKLQYISE LERSVTTLQT EVSALSPRVA FLDHQRLILN VDNSALKQRI 240 AALAQDKIFK DAHQEALKKE IERLRQIYHQ QNLQKMNSNL QQTTPTSQPQ QQPMQLHHHQ 300 QPIAVSQPLG CKDNKEQLLS *

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.28759	0.0	root\| stem

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.13G272500.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003543224.1	0.0	basic leucine zipper 61
Swissprot	Q9M2K4	2e-96	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	I1M336	0.0	I1M336_SOYBN; Uncharacterized protein
STRING	GLYMA13G34770.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88
Representative plant	OGRP126	17	181

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-82	bZIP family protein

Link Out ? help Back to Top
Phytozome	Glyma.13G272500.1.p
Entrez Gene	100101884

Publications ? help Back to Top
Liao Y, et al. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta, 2008. 228(2): p. 225-40 [PMID:18365246] Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]