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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.13G271700.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TCP |
Protein Properties |
Length: 394aa MW: 41777.4 Da PI: 7.23 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G271700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 109.2 | 5.9e-34 | 21 | 126 | 2 | 104 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................... 65
+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l+ +
Glyma.13G271700.1.p 21 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLINKAKSSIDQLAHLppwkptlpspapphlnddhsdkpnpn 110
79**************************************************************88886654322222222222222211 PP
TCP 66 ......ssssaseceaesssssasnsssgkaaksaakskksqksa 104
+ +++++++++
Glyma.13G271700.1.p 111 pnpnpnP-----------------------------NPNPNHSPD 126
1111110.............................222222222 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 394 aa
Download sequence Send
to blast |
MVRGSGGEIV QVEGGHIVRS TGRKDRHSKV CTAKGPRDRR VRLSAHTAIQ FYDVQDRLGY 60 DRPSKAVDWL INKAKSSIDQ LAHLPPWKPT LPSPAPPHLN DDHSDKPNPN PNPNPNPNPN 120 PNHSPDAQIL NQFDHDDGAG AGSSYLPMDN DAIRSFFPTT TSSLVQFQSY PPDLLSRTSS 180 QDLRLSLQSL QDPILLHHNH NNNEHVLFAG TAFDNMVAWN NNSNNNHNNN NHNNNNNNNN 240 NNNTASNDTC GGGGGGGGGG GGGGGGFVFN APSTLPGPAT VASPTVVFGH GYGQGQYFSQ 300 RGPLQSSNSP SVRAWIDAPS FVAAAADHRH HHYLSPAAAA AALVYQSAPP TAAFTAAPGG 360 FSGFRVPARI QGEEEHDGGM SDKPSSASSD SRR*
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