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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.13G105400.1.p |
Common Name | GLYMA_13G105400 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 511aa MW: 57498.2 Da PI: 7.1268 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.13G105400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 34.2 | 4.6e-11 | 314 | 360 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ h + ErrRR+++N++f+ Lr llP+ +K K +iL+ A + ++sL
Glyma.13G105400.1.p 314 QHHMITERRRREKLNESFQALRALLPPG-----TKKAKGTILTTAKDTMRSL 360
67999*********************97.....7999999999999888877 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 511 aa
Download sequence Send
to blast |
MDGVFTLPKA ARADFFRSLV QSFGCTYVCL WQYDSNLSNL FFFDGYCDVT NNQPSSYLGS 60 VAERLFHQYR ALTFDVNHEC VPGVAFRNQL PYIELQLLDL LRLTSTEIQT QFFQIAVFMG 120 CKNGEIELGF SNISQVIKKT ILPSSSFCFM SLSTGSPDQC SSSLLLSSIP GTSQSHFPQT 180 LPTQTHQQQS IQEIDLAPVI PSYFPTPDGE HEAIVRALMS VMSPLSSSSS TSQQHQPRQI 240 LPNYTSIVHP GATAFNTYRS DTMNPNITPY MGSNFRRQSP QNRSFAFFTN LNLMRMRELV 300 SQPASRPIST QHQQHHMITE RRRREKLNES FQALRALLPP GTKKAKGTIL TTAKDTMRSL 360 MDEIEKINLR NQQLMAVLSA KETTVSATST EENKAKPSSS SSNERLNVLV SAVLESSSLS 420 EERMVDVQVT LRGESSRVDV LIRLLEFLER VQNVNLVSMY ANNHIIGGTT INQLTFRLRI 480 IEGNEWDEHA LEEAVRRVVA DTIQWKPLDQ *
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 319 | 324 | ERRRRE |
2 | 320 | 325 | RRRREK |