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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.13G037100.1.p |
| Common Name | GLYMA_13G037100, LOC100807048 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 592aa MW: 66019.2 Da PI: 4.7166 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.13G037100.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 444.5 | 7e-136 | 221 | 591 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
++lL++cA+ +s+g+ ++a++++++l++++s +gdp qR+aay++e+Laar+a s++ +y+al+++e + s ++laa+++++ev+P++
Glyma.13G037100.1.p 221 KQLLYDCARILSEGNEQEATSMINKLRQMVSIQGDPSQRIAAYMVEGLAARVATSGKCIYQALRCKEPP---SNDRLAAMQILFEVCPCF 307
589*****************************************************************9...9***************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
kf++++aN aI eav e++vHiiDfdisqG+Q+++L+q+Las p+ pp++R+Tgv++pes+ s ++ +g+rL+k+Aeelg+pfef+
Glyma.13G037100.1.p 308 KFGYIAANGAIAEAVRDEKKVHIIDFDISQGTQYITLIQTLASMPGRPPHVRLTGVDDPESVqrSIGGINIIGQRLEKLAEELGLPFEFR 397
************************************************************99888899********************** PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
+ va+ +++++ ++L+++pgEal+Vn+++qlh++ de+vs+ +erd++L++vksl+Pk+v+vveq++++n+++Fl rf+ea +yysa+f+
Glyma.13G037100.1.p 398 A-VASGTSNVTQSMLDCRPGEALVVNFAFQLHHMRDETVSTVNERDQLLRMVKSLNPKLVTVVEQDMNTNTSPFLPRFVEAYNYYSAVFN 486
*.7*************************************************************************************** PP
GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
+l+a+lpres++r++vEr++l+++ivn+vaceg+er+er e ++kWr+rl++aGF+p p+s+++ + ++ l+ k + d ++++ee g l
Glyma.13G037100.1.p 487 TLDATLPRESQDRMNVERQCLAKDIVNIVACEGEERIERYEVAGKWRARLSMAGFTPSPMSTNVREAIRKLIIKQYCDKFKIKEEMGGLH 576
****************************************************************************899*********** PP
GRAS 360 lgWkdrpLvsvSaWr 374
+gW+d++L+++SaW+
Glyma.13G037100.1.p 577 FGWEDKNLIVASAWK 591
**************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 592 aa
Download sequence Send
to blast |
MSLVISTELA DTSYGNAKLY TLKGTDVTPD LSSHNFAPDK HRNMYMTKSY SCESYEKYFH 60
DSPTEELIEP SSSSISGNSV HPDGASSYLL RASSGASVIV NNPFDTSIWS TRHRDAYQSN 120
SVSDFVENGS PDGLDFDGEM RLKLQELERA LLSDEEEEEQ GIFETVQSME IDPDMVEWAN 180
PLQDMLLHDS PKESSSSDSS NLSSISSTTK DTSQNSPQTP KQLLYDCARI LSEGNEQEAT 240
SMINKLRQMV SIQGDPSQRI AAYMVEGLAA RVATSGKCIY QALRCKEPPS NDRLAAMQIL 300
FEVCPCFKFG YIAANGAIAE AVRDEKKVHI IDFDISQGTQ YITLIQTLAS MPGRPPHVRL 360
TGVDDPESVQ RSIGGINIIG QRLEKLAEEL GLPFEFRAVA SGTSNVTQSM LDCRPGEALV 420
VNFAFQLHHM RDETVSTVNE RDQLLRMVKS LNPKLVTVVE QDMNTNTSPF LPRFVEAYNY 480
YSAVFNTLDA TLPRESQDRM NVERQCLAKD IVNIVACEGE ERIERYEVAG KWRARLSMAG 540
FTPSPMSTNV REAIRKLIIK QYCDKFKIKE EMGGLHFGWE DKNLIVASAW K*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT031160 | 0.0 | KT031160.1 Glycine max clone HN_CCL_175 GRAS transcription factor (Glyma14g27290.1) mRNA, partial cds. |
