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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.12G018000.2.p |
| Common Name | GLYMA_12G018000 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
E2F/DP |
| Protein Properties |
Length: 273aa MW: 30864.1 Da PI: 6.6909 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.12G018000.2.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 87.4 | 1e-27 | 22 | 104 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71
++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+w+g
Glyma.12G018000.2.p 22 SGRGLRQFSMK---VCEKVESrGRTTYNEVADELVAEfsepsnselppdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWRG 104
689********...*****999*******************************************************.*******98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007049 | Biological Process | cell cycle |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MLMMLAKKKK RGGQRAVGPD KSGRGLRQFS MKVCEKVESR GRTTYNEVAD ELVAEFSEPS 60
NSELPPDQQQ YDEKNIRRRV YDALNVLMAM DIISKDKKEI QWRGLPRTTV NDIEELKTER 120
LGLRNRIEKK TAYLQELEEQ FVGLQNLIQR NEQLYSSGNP PSGGVSLPFI LVQTRPHATV 180
EVEISEDMQL VHFDFNSTPF ELHDDNYVLK AMKFGERPLE DNMTHNLTDG GEGSSMSGLC 240
QPQAPTILNV SNRPPTSPPL PGILKARVKQ EH*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed during the whole cell cycle. {ECO:0000269|PubMed:11669580}. |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:16920782}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
