 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.12G018000.1.p |
| Common Name | GLYMA_12G018000, LOC100798342 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
E2F/DP |
| Protein Properties |
Length: 333aa MW: 37037.5 Da PI: 5.2955 |
| Description |
E2F/DP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.12G018000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | E2F_TDP | 86.9 | 1.5e-27 | 66 | 148 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71
++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+w+g
Glyma.12G018000.1.p 66 SGRGLRQFSMK---VCEKVESrGRTTYNEVADELVAEfsepsnselppdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWRG 148
689********...*****999*******************************************************.*******98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007049 | Biological Process | cell cycle |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005667 | Cellular Component | transcription factor complex |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 333 aa
Download sequence Send
to blast |
MGDEEEEEVL GSGQSASTNS LPPPADSTLL KLNHLDIHAD DAVSHASLAA KKKKRGGQRA 60
VGPDKSGRGL RQFSMKVCEK VESRGRTTYN EVADELVAEF SEPSNSELPP DQQQYDEKNI 120
RRRVYDALNV LMAMDIISKD KKEIQWRGLP RTTVNDIEEL KTERLGLRNR IEKKTAYLQE 180
LEEQFVGLQN LIQRNEQLYS SGNPPSGGVS LPFILVQTRP HATVEVEISE DMQLVHFDFN 240
STPFELHDDN YVLKAMKFGE RPLEDNMTHN LTDGGEGSSM SGLCQPQAPT ILNVSNRPPT 300
SPPLPGILKR NLLQLIDRHN SYSSVQPSHS VG*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed during the whole cell cycle. {ECO:0000269|PubMed:11669580}. |
| Uniprot | TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:16920782}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |
