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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.11G145400.3.p |
Common Name | GLYMA_11G145400, LOC100781869 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GATA |
Protein Properties |
Length: 306aa MW: 34469.4 Da PI: 9.6125 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.11G145400.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 57.6 | 1.7e-18 | 234 | 267 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +
Glyma.11G145400.3.p 234 CLHCEVTKTPQWREGPMGPKTLCNACGVRYRSGR 267
99*****************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0030154 | Biological Process | cell differentiation |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
GO:0001085 | Molecular Function | RNA polymerase II transcription factor binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0003682 | Molecular Function | chromatin binding |
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MKDCWFFDNN FNGLSDESLD DVMDMELLDL PLDFEDVETD AVEEQDWDAQ LKLLEDPPPP 60 LGVFPLQQSS AFCGQTRNEN AKLGSKSFSA SLAKTVRPAY GKTIPVQKVS LKGKDLLQFQ 120 TNSPVSVFES SSSSPSVENS NFELPVIPTK RPRTKRRRLS NISLLYSIPF ILTSPAFQKF 180 QRMDFSKSDI QTQPSGELLC KFKKKQRKKD IPLPTNKIEM KRSSSQESVA PRKCLHCEVT 240 KTPQWREGPM GPKTLCNACG VRYRSGRLFA EYRPASSPTF VASLHSNSHK KVLEIRNRAT 300 QVTVR*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.16556 | 0.0 | cotyledon| leaf| meristem| root| somatic embryo| stem |