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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.11G091900.3.p |
Common Name | GLYMA_11G091900, LOC100800599 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
E2F/DP |
Protein Properties |
Length: 320aa MW: 35641.9 Da PI: 5.3045 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.11G091900.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 87 | 1.4e-27 | 69 | 151 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71
++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+w+g
Glyma.11G091900.3.p 69 SGRGLRQFSMK---VCEKVESrGRTTYNEVADELVAEfsepsnselppdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWRG 151
689********...*****999*******************************************************.*******98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
GO:0007049 | Biological Process | cell cycle |
GO:0005634 | Cellular Component | nucleus |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0000981 | Molecular Function | RNA polymerase II transcription factor activity, sequence-specific DNA binding |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MGGDEEEEEV LGSGQSASTN NSLPPPVDKT ILKLNHLDVH ADDAGSHASL ASGKKKKRGG 60 QRAVGPDKSG RGLRQFSMKV CEKVESRGRT TYNEVADELV AEFSEPSNSE LPPDQQQYDE 120 KNIRRRVYDA LNVLMAMDII SKDKKEIQWR GLPRTTVNDI EELKTERLGL RNRIEKKTAY 180 LQELEEQFIG LQNLIQRNEQ LYSSGNPPSG GVSLPFILVQ TRPHATVEVE ISEDMQLVHF 240 DFNSTPFELH DDNYVLKAMK FGERPQDDNM THNLTDGGEV SSMSGLCQPQ TPTNLNVSNR 300 PPTSPPLPGI LKARVKQEH*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed during the whole cell cycle. {ECO:0000269|PubMed:11669580}. |
Uniprot | TISSUE SPECIFICITY: Ubiquitous. {ECO:0000269|PubMed:16920782}. |
Functional Description ? help
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Source |
Description |
UniProt | Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. The complex DPB/E2FC restricts cell division and lateral root initiation and may function as a negative regulator of E2F-regulated genes. The interaction with SKP2A is controlled by auxin. {ECO:0000269|PubMed:11891240, ECO:0000269|PubMed:16920782}. |