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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Glyma.10G285900.1.p |
Common Name | GLYMA_10G285900, LOC100799005 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TCP |
Protein Properties |
Length: 247aa MW: 26038.1 Da PI: 10.5886 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G285900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 124 | 1.6e-38 | 26 | 202 | 2 | 115 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec....eaesssssasnsss 87
a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tg+++++as++ + + +a+ +s
Glyma.10G285900.1.p 26 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPASFSsvslS----VRAAA-NSL 110
78**************************************************************9999977733331....22222.222 PP
TCP 88 g..................................................................kaaksaakskksqksaasalnla 111
+ +aa++ + + sq+++a + +a
Glyma.10G285900.1.p 111 SspsstsdhkpqllsptpfilgkrirtdedsskdeavsvgpslvgpstppglwalparpdfgqiwsfAAAAAPEMVSVSQQQQA--SLFA 198
223333445566666666666666666666666666666677777777777777776666666665433333333333333333..4444 PP
TCP 112 kesr 115
+++r
Glyma.10G285900.1.p 199 HHHR 202
4444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 247 aa
Download sequence Send
to blast |
MSNSDATTNG VSNGAIIDAQ RQQALAVKKP PSKDRHSKVD GRGRRIRMPI ICAARVFQLT 60 RELGHKSDGQ TIEWLLRQAE PSIIAATGSG TTPASFSSVS LSVRAAANSL SSPSSTSDHK 120 PQLLSPTPFI LGKRIRTDED SSKDEAVSVG PSLVGPSTPP GLWALPARPD FGQIWSFAAA 180 AAPEMVSVSQ QQQASLFAHH HRQQQQQAIG EASAARVGNY LPGHLNLLAS LSGGPGNSGR 240 RDDEPR*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.20745 | 0.0 | cotyledon| hypocotyl| leaf| root| seed coat| somatic embryo |