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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Glyma.10G269600.1.p | ||||||||
Common Name | GLYMA_10G269600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family | G2-like | ||||||||
Protein Properties | Length: 226aa MW: 25734.6 Da PI: 6.2831 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 61 | 2.5e-19 | 39 | 90 | 3 | 55 |
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 ++WtpeLH +F ea++ + G++ A Pk+il lm+ + Lt+ +v+SHLQk+R+ Glyma.10G269600.1.p 39 SIVWTPELHLKFTEAMHMI-GENTARPKQILSLMNEPYLTVRQVASHLQKHRS 90 579****************.9******************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.2E-20 | 35 | 94 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.25E-16 | 36 | 94 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-18 | 37 | 91 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 5.8E-6 | 42 | 89 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MLREKGTIDG NAMPDSGEST PMSSYNYHYH CLFDERKRSI VWTPELHLKF TEAMHMIGEN 60 TARPKQILSL MNEPYLTVRQ VASHLQKHRS RLKHKENAHN TNLPSLSTSS SLSHKAKFPL 120 PPKESTSGAK EHKRAFDPSV STPKASFNEN HNQNQFFVNN IGIEESNILP VDQNQPAIEY 180 NDLIKKFVED CDNFDLFENE TNPDDVDQYS EMLRTILDGS SSSPW* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Glyma.10G269600.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014618329.2 | 1e-170 | transcription activator GLK1 | ||||
TrEMBL | A0A0R0I6I2 | 1e-168 | A0A0R0I6I2_SOYBN; Uncharacterized protein | ||||
TrEMBL | A0A445ITE8 | 1e-168 | A0A445ITE8_GLYSO; Transcription activator GLK2 (Fragment) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14404 | 16 | 18 |
Representative plant | OGRP1157 | 17 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44190.1 | 8e-14 | GOLDEN2-like 2 |
Link Out ? help Back to Top | |
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Phytozome | Glyma.10G269600.1.p |