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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G257500.1.p |
Common Name | GLYMA_10G257500 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 359aa MW: 39394.6 Da PI: 4.5746 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G257500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 32 | 2.3e-10 | 280 | 320 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
r+RR+riN+++ L+ l+P+ +K++ +++Le+Av+Y+k Lq
Glyma.10G257500.1.p 280 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 320
9******************97.....8******************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009733 | Biological Process | response to auxin |
GO:0016049 | Biological Process | cell growth |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0048766 | Biological Process | root hair initiation |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MEPVQLISEE WGSLCGFHTT EEADFMAQLF GCNTLVTEKH CGNTTLGFWP GHDESTIVAM 60 TDTNSNSYLP PNVTDTNFLC FSQGSSSSTD NSGNNIFSIT SSGAYSCDPE ANFDSVSMVL 120 CLGDAKFSPH SFQCDDNSSQ QINENTDEES SLDPWKLAIA DNNSQAKREY EMMVSEPVEV 180 DRSRNLENLA KRLKSSIEVS KTLRSAKSGK NSKSASVSND EDDRSLSLQA QRNSCFSQSD 240 SNAYLEPNGG ASKDPAPPNL HRKSRATTGA ATDPQSLYAR KRRERINERL RILQNLVPNG 300 TKVDISTMLE EAVQYVKFLQ LQIKLLSSDD LWMYAPIAYN GINIGLDLSI SPTKGISM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC235177 | 0.0 | AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence. |