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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Glyma.10G215000.1.p |
| Common Name | LOC100809458 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 406aa MW: 46004.4 Da PI: 6.3321 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.10G215000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 305 | 1.8e-93 | 24 | 403 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
l++lLl+ A+ v+++++ + L+ l +++s +gd++qR++ayf+ +Laarl+ + s y+ l ++t+ +ee+ a++ ++ vsP+
Glyma.10G215000.1.p 24 LIHLLLSTATSVDDNNMDSSLENLTDLYQTVSVTGDSVQRVVAYFVDGLAARLLTKKSPFYDMLMEEPTT----EEEFLAFTDLYRVSPY 109
689**********************************************************999998887....677888899******* PP
GRAS 91 lkfshltaNqaIleavege.....ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelg 173
++f+h+taNqaIlea+e+e +++H+iDfd+s+G+QWp+L+q+L++++ ++ slRiTg+g+ s +el+et++rL +f + +g
Glyma.10G215000.1.p 110 FQFAHFTANQAILEAFEKEeernnRALHVIDFDVSYGFQWPSLIQSLSEKAtsGNRISLRITGFGK----SLKELQETESRLVSFSKGFG 195
*****************9988877789**********************99755566*********....9*****************97 PP
GRAS 174 .vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
+ fef+ l l ++ +Lr k++E++aVnlv l +l + + ++++L +v sl+P +vvvveqe +++ sFl rf+++l+
Glyma.10G215000.1.p 196 sLVFEFQGL----LRGSRVINLRKKKNETVAVNLVSYLNTLS----CFMK-ISDTLGFVHSLNPSIVVVVEQEGSRSPRSFLSRFTDSLH 276
689*****8....77778899***************999997....3333.578************************************ PP
GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.s... 346
y++a+fdsl+ lp es er +E++llg+ei++++ + + + e++e W++r+e+ GF + ++s+k + qaklll++ +
Glyma.10G215000.1.p 277 YFAAMFDSLDDCLPLESAERLRIEKKLLGKEIKSMLNNDVDGgvDCPKYERMEAWKARMENHGFVATKISSKSMIQAKLLLKMRThFcpl 366
************************************9986663356799********************************986433111 PP
GRAS 347 ....dg...yrveee.sgslv.lgWkdrpLvsvSaWr 374
+g +rv e+ +g ++ lgW++r L++vSaW+
Glyma.10G215000.1.p 367 qfeeEGgggFRVSERdEGRAIsLGWQNRFLLTVSAWQ 403
1111223347777654555557**************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 406 aa
Download sequence Send
to blast |
MREQMLRQDH RRKGVVEDGN GLPLIHLLLS TATSVDDNNM DSSLENLTDL YQTVSVTGDS 60
VQRVVAYFVD GLAARLLTKK SPFYDMLMEE PTTEEEFLAF TDLYRVSPYF QFAHFTANQA 120
ILEAFEKEEE RNNRALHVID FDVSYGFQWP SLIQSLSEKA TSGNRISLRI TGFGKSLKEL 180
QETESRLVSF SKGFGSLVFE FQGLLRGSRV INLRKKKNET VAVNLVSYLN TLSCFMKISD 240
TLGFVHSLNP SIVVVVEQEG SRSPRSFLSR FTDSLHYFAA MFDSLDDCLP LESAERLRIE 300
KKLLGKEIKS MLNNDVDGGV DCPKYERMEA WKARMENHGF VATKISSKSM IQAKLLLKMR 360
THFCPLQFEE EGGGGFRVSE RDEGRAISLG WQNRFLLTVS AWQSV*
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
