PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

G2-like

Protein Properties

Length: 388aa MW: 43100.2 Da PI: 8.7214

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.10G196600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	106.7	1.3e-33	116	170	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG+ kAtPk+i+++m+vkgLtl+h+kSHLQkYRl Glyma.10G196600.1.p 116 KPRLRWTADLHERFVDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRL 170 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	10.726	113	173	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.6E-32	113	171	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.3E-23	116	171	IPR006447	Myb domain, plants
SuperFamily	SSF46689	1.54E-16	116	172	IPR009057	Homeodomain-like
Pfam	PF00249	1.1E-7	118	169	IPR001005	SANT/Myb domain
Pfam	PF14379	6.3E-13	214	259	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0016021	Cellular Component	integral component of membrane
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MQKRREESDK IPVKRDSASS LPQPQSLVLF TSPFSPFPFL LPLSFAKWVI ISFSHNTIFF 60 TFSFFFASLR WGFKFHHRNR MFSRLIHPHE GQEDMQGGSN HAHLGDPCLV LTSDPKPRLR 120 WTADLHERFV DAVTQLGGAS KATPKAIMRT MNVKGLTLYH LKSHLQKYRL GKQSGKDSDE 180 GLKDGMSASY LQESPGTDNS SPKLPASDAN EGHEVKEALR AQMEVQSKLH LLVEAEKHLQ 240 IRQDAERRYM GMLERACKML ADQFIGDVII DRDGQKFQGL ENKTSRSPLV DHGGFFPAAC 300 TEVGGMHVSE VPPILQPQGA ECSSESCLKS LESLGGLTLE GSPGGSKKRM LNLDSMVAPL 360 IWSEANTRTQ GIHLAQVNPP GMTRYGM*

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MQKRREESDK IPVKRDSASS LPQPQSLVLF TSPFSPFPFL LPLSFAKWVI ISFSHNTIFF  60
TFSFFFASLR WGFKFHHRNR MFSRLIHPHE GQEDMQGGSN HAHLGDPCLV LTSDPKPRLR  120
WTADLHERFV DAVTQLGGAS KATPKAIMRT MNVKGLTLYH LKSHLQKYRL GKQSGKDSDE  180
GLKDGMSASY LQESPGTDNS SPKLPASDAN EGHEVKEALR AQMEVQSKLH LLVEAEKHLQ  240
IRQDAERRYM GMLERACKML ADQFIGDVII DRDGQKFQGL ENKTSRSPLV DHGGFFPAAC  300
TEVGGMHVSE VPPILQPQGA ECSSESCLKS LESLGGLTLE GSPGGSKKRM LNLDSMVAPL  360
IWSEANTRTQ GIHLAQVNPP GMTRYGM*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	5e-19	116	172	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	5e-19	116	172	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	5e-19	116	172	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	5e-19	116	172	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	6e-19	116	172	2	58	Protein PHOSPHATE STARVATION RESPONSE 1
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Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.6093	0.0	hypocotyl\| pod\| stem

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.10G196600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT095107	0.0	BT095107.1 Soybean clone JCVI-FLGm-19M17 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028185945.1	0.0	protein PHR1-LIKE 2-like isoform X1
TrEMBL	A0A445IPV7	0.0	A0A445IPV7_GLYSO; Protein PHR1-LIKE 2 isoform A
TrEMBL	K7LKE6	0.0	K7LKE6_SOYBN; Uncharacterized protein
STRING	GLYMA10G34050.3	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6618	33	49
Representative plant	OGRP78	17	262

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	5e-63	G2-like family protein

Link Out ? help Back to Top
Phytozome	Glyma.10G196600.1.p