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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G162300.1.p |
Common Name | GLYMA_10G162300, LOC100781299 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 329aa MW: 35784.4 Da PI: 6.6603 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G162300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28.9 | 2e-09 | 177 | 221 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
h+++Er RR+ri +++ L+el+P+ + K + a++L + v+Y+k L
Glyma.10G162300.1.p 177 HSIAERLRRERIAERMKALQELVPSiN------KTDRAAMLDEIVDYVKFL 221
99***********************77......****************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MAGNSSSEGL VDDFFEQILA VPEAAAFRGA AGLMPLGLNL EQAGFLRHQH QINVDDVVHV 60 NVDDATIHHH HLTLHNNTTS SSPSSTAPIT QDRDSMHMRG LFSAFGQLHT PTLAHSIRPT 120 LPSPPPPRQP QLHLHHHNNQ QFQGQPAAAP ASMAAMPQPP GIRPRVRARR GQATDPHSIA 180 ERLRRERIAE RMKALQELVP SINKTDRAAM LDEIVDYVKF LRLQVKVLSM SRLGGAGAVA 240 QLVADVPLSA VEGDQDIEGV SNEQAWDKWS NDGTEQQVAK LMEEDVGAAM QFLQSKALCI 300 MPISLASSIF RMPQSEASTG IKPESNSH*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed constitutively in roots, leaves, stems, and flowers. {ECO:0000269|PubMed:12679534}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for ovule fertilization. {ECO:0000269|PubMed:15634699}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT141638 | 1e-174 | BT141638.1 Lotus japonicus clone JCVI-FLLj-6C12 unknown mRNA. |