PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G162100.1.p
Common NameGLYMA_10G162100, SBZ1
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 418aa    MW: 44606.4 Da    PI: 6.0628
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G162100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.88.5e-17218272357
                          XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                          ++kr rr+ +NRe+ArrsR+RK+a +  Le+ v +L +eN++L k+l   +++++
  Glyma.10G162100.1.p 218 DVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYS 272
                          689*****************************************99998888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.6E-13213271No hitNo description
SMARTSM003384.4E-20216280IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335218270IPR004827Basic-leucine zipper domain
PfamPF001704.1E-15219271IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.62E-12220270No hitNo description
CDDcd147022.15E-7221272No hitNo description
PROSITE patternPS000360223238IPR004827Basic-leucine zipper domain
PfamPF124982.1E-47287414IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0071215Biological Processcellular response to abscisic acid stimulus
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    Send to blast
MDRVFSVDDI SDHFWPPPPI PVSGANTSSQ MSRSASEWAF QRFIQEASAS APSPPSSSSP  60
ADVVFVEIDD QPKPTPPPPS HGGVLPSDPG PVALDSEEYQ AFLKSKLNLA CAAVAMTRGS  120
LAKSQDPSPF SDGGSQPTNP SLVGSQTTSK GSIPSGNDQS KLQDKDINAP VGIPSIPAIQ  180
KKPAVAIRPS TSGSSREQSD DEDIEGETSM NDNTDPADVK RVRRMLSNRE SARRSRRRKQ  240
AHLTDLETQV SQLRGENSTL LKRLTDVSQK YSDSAVDNRV LKADVETLRA KVKMAEETVK  300
RITGLNPMPH AMSDISSLGL PSFDGRSPSD TSADASVPVQ DDPHHHFYQP TLNNPIPSHD  360
PIVNNGLGGI SSIENVQQQN AAAVVGGNKI GQTASLQRVA SLEHLQKRIR GGPPSEQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232239RRSRRRKQ
2234239SRRRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.53020.0cotyledon| flower| hypocotyl| leaf| root| seed coat| somatic embryo| stem
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00040PBMTransfer from AT5G28770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G162100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2466650.0AB246665.1 Glycine max SBZ1 mRNA for bZIP protein, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001237953.10.0bZIP transcription factor protein SBZ1
SwissprotQ990901e-130CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLB2DBE70.0B2DBE7_SOYBN; BZIP protein
STRINGGLYMA10G30410.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Representative plantOGRP18391639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-79bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]