PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 418aa MW: 44606.4 Da PI: 6.0628

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.10G162100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.8	8.5e-17	218	272	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr rr+ +NRe+ArrsR+RK+a + Le+ v +L +eN++L k+l +++++ Glyma.10G162100.1.p 218 DVKRVRRMLSNRESARRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYS 272 689*****************************************99998888776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.6E-13	213	271	No hit	No description
SMART	SM00338	4.4E-20	216	280	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.335	218	270	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.1E-15	219	271	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.62E-12	220	270	No hit	No description
CDD	cd14702	2.15E-7	221	272	No hit	No description
PROSITE pattern	PS00036	0	223	238	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	2.1E-47	287	414	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0071215	Biological Process	cellular response to abscisic acid stimulus
GO:0071333	Biological Process	cellular response to glucose stimulus
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0042802	Molecular Function	identical protein binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence Send to blast
MDRVFSVDDI SDHFWPPPPI PVSGANTSSQ MSRSASEWAF QRFIQEASAS APSPPSSSSP 60 ADVVFVEIDD QPKPTPPPPS HGGVLPSDPG PVALDSEEYQ AFLKSKLNLA CAAVAMTRGS 120 LAKSQDPSPF SDGGSQPTNP SLVGSQTTSK GSIPSGNDQS KLQDKDINAP VGIPSIPAIQ 180 KKPAVAIRPS TSGSSREQSD DEDIEGETSM NDNTDPADVK RVRRMLSNRE SARRSRRRKQ 240 AHLTDLETQV SQLRGENSTL LKRLTDVSQK YSDSAVDNRV LKADVETLRA KVKMAEETVK 300 RITGLNPMPH AMSDISSLGL PSFDGRSPSD TSADASVPVQ DDPHHHFYQP TLNNPIPSHD 360 PIVNNGLGGI SSIENVQQQN AAAVVGGNKI GQTASLQRVA SLEHLQKRIR GGPPSEQ*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence Send to blast

MDRVFSVDDI SDHFWPPPPI PVSGANTSSQ MSRSASEWAF QRFIQEASAS APSPPSSSSP  60
ADVVFVEIDD QPKPTPPPPS HGGVLPSDPG PVALDSEEYQ AFLKSKLNLA CAAVAMTRGS  120
LAKSQDPSPF SDGGSQPTNP SLVGSQTTSK GSIPSGNDQS KLQDKDINAP VGIPSIPAIQ  180
KKPAVAIRPS TSGSSREQSD DEDIEGETSM NDNTDPADVK RVRRMLSNRE SARRSRRRKQ  240
AHLTDLETQV SQLRGENSTL LKRLTDVSQK YSDSAVDNRV LKADVETLRA KVKMAEETVK  300
RITGLNPMPH AMSDISSLGL PSFDGRSPSD TSADASVPVQ DDPHHHFYQP TLNNPIPSHD  360
PIVNNGLGGI SSIENVQQQN AAAVVGGNKI GQTASLQRVA SLEHLQKRIR GGPPSEQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	232	239	RRSRRRKQ
2	234	239	SRRRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.5302	0.0	cotyledon\| flower\| hypocotyl\| leaf\| root\| seed coat\| somatic embryo\| stem

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00040	PBM	Transfer from AT5G28770	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.10G162100.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB246665	0.0	AB246665.1 Glycine max SBZ1 mRNA for bZIP protein, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001237953.1	0.0	bZIP transcription factor protein SBZ1
Swissprot	Q99090	1e-130	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	B2DBE7	0.0	B2DBE7_SOYBN; BZIP protein
STRING	GLYMA10G30410.1	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4176	33	58
Representative plant	OGRP1839	16	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-79	bZIP family protein

Link Out ? help Back to Top
Phytozome	Glyma.10G162100.1.p
Entrez Gene	100170702

Publications ? help Back to Top
Liao Y, et al. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta, 2008. 228(2): p. 225-40 [PMID:18365246] Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]