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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G142600.4.p |
Common Name | GLYMA_10G142600 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 591aa MW: 62875.1 Da PI: 6.7169 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G142600.4.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 50.3 | 4.2e-16 | 364 | 410 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn Er+RRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq
Glyma.10G142600.4.p 364 VHNLSERKRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 410
6*************************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 591 aa
Download sequence Send
to blast |
MSVPSSEVDF CQDEDVLPWL DYPSIDGSLQ QEYGSDFLPA SNSFTLLDKK SNGNMAFRDS 60 QKTSEEQGNV FKGSSAGQVE TARPKASSTS QLFPPSLHQC QTSFVSSRSR ASDITENNNT 120 SNANQDASYG KITHILSSSS DFSNAKVQKC DPPMNSNGSS STIMNFSHFA RPAAMVRANL 180 HSIGLKSGLS SSRSDSMEMK NKGAAATSSN PPESILVDSS VECLKEPIIQ CQQVVEQSKA 240 DVNSLLPKSV EQNAVPSKQS EPAGKESAAK IDLIPNQVPG DNGTKGQTAA EKSKEPAVAS 300 SSVCSGNGTD QGSEEPNQNL KRKRKDTDDS ECHSEDVEEE SAGAKKTAGG RGGAGSKRSR 360 AAEVHNLSER KRRDRINEKM RALQELIPNC NKVDKASMLD EAIEYLKTLQ LQVQIMSMGA 420 GLYMPPMMLP AGMQHMHAPH MAPFSPMGVG MHMGYGMGYG MGMPDMNGGS SRFPMIQVPQ 480 MQGTHIPVAH MSGSTAFHGM ARANPPGFGL PGQGHPMPMP RAPMFPFSGG QMPNVDPQVK 540 QSTGGRDSTS QMPTQCEAAA VGFEQSTLAH NNGHATKAND NGSVNPGPGR *
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.18033 | 0.0 | cotyledon| epicotyl| hypocotyl| leaf| root| stem |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031131 | 0.0 | KT031131.1 Glycine max clone HN_WYQ_57 bHLH transcription factor (Glyma10g28290.3) mRNA, partial cds. |