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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G142600.1.p |
Common Name | GLYMA_10G142600, Glyma10g28290.3, LOC100820151 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 692aa MW: 74150.7 Da PI: 6.889 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G142600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 50 | 5.2e-16 | 465 | 511 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
hn Er+RRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq
Glyma.10G142600.1.p 465 VHNLSERKRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 511
6*************************8.....6******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 692 aa
Download sequence Send
to blast |
MPLYELYRLA REKLGKETTS TRAPDQCSSP ENDFFELVWE NGQISSQGQS SRVRRSPSCK 60 SLPSHCLPSH SPKARDKDVG YGSYTRLGKF GDLDSGLNEI PMSVPSSEVD FCQDEDVLPW 120 LDYPSIDGSL QQEYGSDFLP ASNSFTLLDK KSNGNMAFRD SQKTSEEQGN VFKGSSAGQV 180 ETARPKASST SQLFPPSLHQ CQTSFVSSRS RASDITENNN TSNANQDASY GKITHILSSS 240 SDFSNAKVQK CDPPMNSNGS SSTIMNFSHF ARPAAMVRAN LHSIGLKSGL SSSRSDSMEM 300 KNKGAAATSS NPPESILVDS SVECLKEPII QCQQVVEQSK ADVNSLLPKS VEQNAVPSKQ 360 SEPAGKESAA KIDLIPNQVP GDNGTKGQTA AEKSKEPAVA SSSVCSGNGT DQGSEEPNQN 420 LKRKRKDTDD SECHSEDVEE ESAGAKKTAG GRGGAGSKRS RAAEVHNLSE RKRRDRINEK 480 MRALQELIPN CNKVDKASML DEAIEYLKTL QLQVQIMSMG AGLYMPPMML PAGMQHMHAP 540 HMAPFSPMGV GMHMGYGMGY GMGMPDMNGG SSRFPMIQVP QMQGTHIPVA HMSGSTAFHG 600 MARANPPGFG LPGQGHPMPM PRAPMFPFSG GQMPNVDPQV KQSTGGRDST SQMPTQCEAA 660 AVGFEQSTLA HNNGHATKAN DNGSVNPGPG R*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.18033 | 0.0 | cotyledon| epicotyl| hypocotyl| leaf| root| stem |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031131 | 0.0 | KT031131.1 Glycine max clone HN_WYQ_57 bHLH transcription factor (Glyma10g28290.3) mRNA, partial cds. |