PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Glyma.10G111400.1.p

Common Name

GLYMA_10G111400, LOC100816239

Organism

Glycine max

Taxonomic ID

3847

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

WRKY

Protein Properties

Length: 306aa MW: 33394.3 Da PI: 9.4514

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.10G111400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	59.8	5.1e-19	3	46	16	58
TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 16 kgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hn Glyma.10G111400.1.p 3 KGNPCPRAYYRCTASpSCPVRKQVQRCAEDMSILITTYEGTHNN 46 89*********999************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	20.438	1	49	IPR003657	WRKY domain
SuperFamily	SSF118290	1.7E-15	3	49	IPR003657	WRKY domain
SMART	SM00774	2.5E-14	3	48	IPR003657	WRKY domain
Pfam	PF03106	2.7E-15	3	45	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	3.9E-18	3	49	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MGKGNPCPRA YYRCTASPSC PVRKQVQRCA EDMSILITTY EGTHNNPLPM SATAMACKTF 60 ATASMLQSPS LSSQHGLVDS AISSIINSSA PYYNPNNALN FSTHQVSRRQ QFYFPNSSIS 120 TLNSHPTITL DLTTPPTSSS NSSFTCMPKY SSTNLNFSSG FSPLHSSMPQ SPWNRYSGYS 180 NSGTLYQNRH QGGNYMLNTG NQNQPHSVGH LHQPIYMSNN STISQHSFPN PIVAATEAII 240 RSNPKFQSAL AIALTTYVGN EASSGRTREN HVLESAELMK LKLLRSENSI GNSSIFPLPL 300 PEQRK*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.10G111400.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006589957.1	0.0	probable WRKY transcription factor 61
TrEMBL	A0A0R0HRY8	0.0	A0A0R0HRY8_SOYBN; Uncharacterized protein
TrEMBL	A0A445IL09	0.0	A0A445IL09_GLYSO; Glutamate receptor 3.4
STRING	GLYMA10G14610.2	0.0	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF650	34	134
Representative plant	OGRP14	17	875

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G04450.1	9e-30	WRKY family protein

Link Out ? help Back to Top
Phytozome	Glyma.10G111400.1.p
Entrez Gene	100816239