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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.10G093100.1.p |
Common Name | GLYMA_10G093100, LOC100810203 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 385aa MW: 42031.7 Da PI: 8.5882 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.10G093100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39.9 | 7.4e-13 | 312 | 357 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri +++ +L+el+P+ +k + a++L +AveYIk+Lq
Glyma.10G093100.1.p 312 SIAERVRRTRISERMRKLQELVPNM----DKQTNTADMLDLAVEYIKDLQ 357
689*********************7....688*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045944 | Biological Process | positive regulation of transcription from RNA polymerase II promoter |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0001228 | Molecular Function | transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MDSHIHHHHH QGYQQHQNQP SSGLLRFRSA PSSLLSNLTP FVSEDFGSSS FRELQGNNNK 60 GCSKDLSSMN SHKGVYGGGL PPHYPRHRGS SSSAATSSSA MEGSFGLVGS MGMNHETPQN 120 GLGSSLLRHS TSPAGLFSNN NINFQNGFAT MKGVGNYGGV NGSNGELSPC INGLKNQVSF 180 SPRNASSLGM LSQISEIGNE DIEATSPDDD TRHEGNDTQQ YGPGFPYGSW NDTPQLSENL 240 SGLKRGRSSN EKMFSDEIQN GELGNQVNML SHHLSLPKTS AEMITMKKLL QFPDSVPCKI 300 RAKRGCATHP RSIAERVRRT RISERMRKLQ ELVPNMDKQT NTADMLDLAV EYIKDLQKQF 360 KTLSEKRAKC ECTSMQKADT NQIA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 1e-102 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |