PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.10G064900.1.p
Common NameGLYMA_10G064900
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family Trihelix
Protein Properties Length: 458aa    MW: 52463.8 Da    PI: 6.364
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.10G064900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.31.4e-1199180186
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 
                          +Wt+ +v++Li a+ +++++ +++   +++ ++ s  m+++g  +s  qC++k+++lnkryk+++++ +k+ +++++++  ++d+++
  Glyma.10G064900.1.p  99 KWTDTMVRLLIMAVYYIGDEAGSE---GTDKKKASGLMQKKGKWKS--QCEDKFSDLNKRYKRVNDILGKGtACRVVENQNLLDSMD 180
                          7****************9988876...5566678999999996665..9**********************559********99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.5E-1097205No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MFSGLVGVES PLQQQQQEQN PHHLQHHPQM VPYATHHDTE NPHHPHLHHS IKQGYPPFLS  60
KTKQQQQQQQ QQSSFSDDDE PGSADDDPKK KVSPWQRMKW TDTMVRLLIM AVYYIGDEAG  120
SEGTDKKKAS GLMQKKGKWK SQCEDKFSDL NKRYKRVNDI LGKGTACRVV ENQNLLDSMD  180
LSPKMKEEVK KLLNSRHLFF REMCAYHNSC GNGNNNAPQQ GESGGEVSQP QSQSQAQPHH  240
QQQQQPQQQR CFHSSEVANL GGSGVEGLRV LKVGNGEEGD DDEDEDDDES EDDSDEDEDD  300
LGEGGSRGHV GHGHEDIEDE NDGRTMRKRA RKVGGGVSNS LSPQTMQQLS AEVTGMFQDV  360
GKSAWDKKQW MRNRMKQLEE QRISYHTQAF ELEKQRLKWA RFSSKKEREM ERAKLENERR  420
KLENERMVLL IRQKELELMG LQPQQQQHQQ QQQHSST*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.347370.0pod| somatic embryo
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.10G064900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028182412.10.0stress response protein NST1-like isoform X2
TrEMBLI1L9630.0I1L963_SOYBN; Uncharacterized protein
STRINGGLYMA10G07460.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48203457
Representative plantOGRP9974610
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.11e-53sequence-specific DNA binding transcription factors