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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.09G245300.1.p |
Common Name | GLYMA_09G245300, LOC102665993 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Trihelix |
Protein Properties |
Length: 323aa MW: 36039.6 Da PI: 10.2142 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.09G245300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 63.7 | 4.1e-20 | 35 | 109 | 1 | 70 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekk 70
+Wt +e+ aLi+a+r+++ +l+r++lk+++W+ev++ + + + ++p+qC++k+e+l+kry+ + ++ ++
Glyma.09G245300.1.p 35 CWTPEETSALIDAYRDKWYSLGRTNLKATHWQEVADSVtaqcpNASPTAKTPVQCRHKMEKLRKRYRTEIQRLRN 109
8******************************************9***********************99988765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MASPSSPTDS NPPSALPLPI PPPPSTSSRR LPPPCWTPEE TSALIDAYRD KWYSLGRTNL 60 KATHWQEVAD SVTAQCPNAS PTAKTPVQCR HKMEKLRKRY RTEIQRLRNL PLPRLNNAST 120 NSPSSWLHFK SMDSMEKGPN HKPHADNNLN INNNFHDDDV DDDDLYEEFK NAPGSNTRSL 180 NKLYKNNNGF NSAGSGSGSG FRIRIPAGVP QQQHHTASSN KIFNSHPPPG MGPRGGGVKR 240 ERERDAVAEM VGAIKVLRDG FVRMEQMKME MAREIESMRM EMEMKRTEMI LDSQQRIVEA 300 FARAVSQKRT KGKSTPSPSS QP*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.7038 | 0.0 | cotyledon| hypocotyl| leaf| root| somatic embryo| stem |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 1e-125 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |