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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.09G150000.2.p |
Common Name | GLYMA_09G150000, LOC100796473 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 274aa MW: 31454.6 Da PI: 8.4918 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.09G150000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 42.4 | 1.3e-13 | 101 | 153 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++ h+e+Er+RR+++ + ++ Lr+llP + ++K s ++ +Av+YIk++q
Glyma.09G150000.2.p 101 KKMIHKEIERQRRQEMATFYASLRSLLPLEF--IKGKRSISDHMNEAVNYIKHMQ 153
5788*************************65..*********************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006357 | Biological Process | regulation of transcription from RNA polymerase II promoter |
GO:0090575 | Cellular Component | RNA polymerase II transcription factor complex |
GO:0000977 | Molecular Function | RNA polymerase II regulatory region sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MNLLPSAPIS KVDDSLEHSL SFESTMFPLQ RGNELVIQFS NSPHHHLQHK MSQDLILDDY 60 ASLDVNDSNQ KFSTSSISQP TKKLFYGANK KNHDYSNEHK KKMIHKEIER QRRQEMATFY 120 ASLRSLLPLE FIKGKRSISD HMNEAVNYIK HMQKHIKELG AKRDELKKLS NHSNNMENNH 180 EGLHTSCNFT VHEKNGIMGI EITSVFREEK PKISKLLQFL TEEGLEVVSF FSTEVNGRLL 240 HSVQCEVNHS NSVDPSELRK KVSKAFSTFR CSD*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 3e-98 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |