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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Glyma.09G133600.1.p |
| Common Name | GLYMA_09G133600 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
GRAS |
| Protein Properties |
Length: 541aa MW: 59238.9 Da PI: 8.6808 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.09G133600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 230.1 | 1e-70 | 281 | 540 | 119 | 374 |
GRAS 119 isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvl 208
i +G Q++ Ll+aL++R ++ ++i +v++ +g +e+++++g+ L+ +Ae+l+++fef++++++++++l+ e+L ++ +++l Vn+++
Glyma.09G133600.1.p 281 IVEGKQYLHLLNALSAR-GQNVAVKIAAVAE--KGGEERVRAVGDMLRLLAERLRIRFEFKIVATQKIAELTRESLGCDADDVLMVNFAF 367
789*************9.66689********..77***************************9999************************ PP
GRAS 209 qlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres....eerikvErellgre 293
+l +++desvs e++rde+L+ vk+l P+vv+vveqe++ n+++Fl+r++e+l+yy al++s+ ++++++++ ++r+ +E+ l+r+
Glyma.09G133600.1.p 368 KLNKIPDESVSPENPRDELLRRVKRLAPRVVTVVEQEINGNTAPFLARVAETLSYYGALLESIeATTVGKDNsinnSDRVRLEEG-LSRK 456
***************************************************************77788887778879999****9.**** PP
GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk...sdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ n vaceg++r+er+e ++kWr+r+++aGF+ pls+++++++k+ l + + g +v+ee+g +++gW++r+L+++SaWr
Glyma.09G133600.1.p 457 LHNSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQSMVESIKARLISANnrvNSGLTVKEENGGICFGWMGRTLTVASAWR 540
*****************************************99887664443236789*************************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 541 aa
Download sequence Send
to blast |
MSSPGFPGGG SASEFFAGAG VFGGRSIPGA TMNNPNAAAS ATINNLHPLY RTQQQQNLPA 60
MFLDPSSQIA QRQTPTFIGK RTLTEFQAYN QTNNNPNHVL SNLLLRSVKP RTSLYHTSMD 120
FPVPELQNQN LYSNQTQRFG VPLLHQLRPQ PINLPNNGPV PMTGPNFGYR NSNLGLPQNQ 180
NRVHSSEPEK KIMDHRLLEL EKQLLEDNDD EGEADAASVI TTSEWSETYQ NLISPSPVQK 240
PVLTTTSPTS STTSSTSSSS SVASPASGCS KQTLMEAASA IVEGKQYLHL LNALSARGQN 300
VAVKIAAVAE KGGEERVRAV GDMLRLLAER LRIRFEFKIV ATQKIAELTR ESLGCDADDV 360
LMVNFAFKLN KIPDESVSPE NPRDELLRRV KRLAPRVVTV VEQEINGNTA PFLARVAETL 420
SYYGALLESI EATTVGKDNS INNSDRVRLE EGLSRKLHNS VACEGRDRVE RCEVFGKWRA 480
RMSMAGFELK PLSQSMVESI KARLISANNR VNSGLTVKEE NGGICFGWMG RTLTVASAWR 540
*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
