PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 240aa MW: 26187.5 Da PI: 8.4718

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.08G077400.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.1	2.1e-14	155	208	2	55
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 + l+++rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L +e e++ + Glyma.08G077400.1.p 155 ATLQKQRRMIKNRESAARSRERKQAYTSELEYLVHQLEQENVQLLNEEAEMRRQ 208 5799**************************************998665555444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.0E-13	154	218	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.0E-13	155	210	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.105	156	208	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.43E-17	158	219	No hit	No description
SuperFamily	SSF57959	1.5E-10	158	209	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.1E-13	159	210	No hit	No description
PROSITE pattern	PS00036	0	161	176	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence Send to blast
MASSKVVSTN PDLPRNSSSS SSSSSTSPIS PLSSLLSDLH PMDDILKSIS PKSVDDVWND 60 IVTGATVHDA VSATTTDNAD AAMTLEDFLT KAIREEDVRG APPPPPPPPP SSFLPFPADG 120 SSSSVEPFAN GVSAAPSNSV QKGKRRAVEE PVDKATLQKQ RRMIKNRESA ARSRERKQAY 180 TSELEYLVHQ LEQENVQLLN EEAEMRRQRK KQLFECIIPI EVMPKPKKKL RRVNSAQSL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	224	230	KPKKKLR

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.7043	0.0	hypocotyl\| root\| seed coat\| stem

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.08G077400.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP015034	2e-40	AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001234974.1	1e-173	transcription factor bZIP10
Refseq	XP_028243143.1	1e-173	G-box-binding factor 4-like isoform X1
TrEMBL	A0A445JBB8	1e-171	A0A445JBB8_GLYSO; G-box-binding factor 4 isoform A
TrEMBL	A4ZGU1	1e-171	A4ZGU1_SOYBN; Transcription factor bZIP10
STRING	GLYMA08G08220.1	1e-172	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2028	34	81
Representative plant	OGRP8662	7	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	6e-25	bZIP family protein

Link Out ? help Back to Top
Phytozome	Glyma.08G077400.1.p
Entrez Gene	100101890

Publications ? help Back to Top
Liao Y, et al. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta, 2008. 228(2): p. 225-40 [PMID:18365246]