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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.08G037400.1.p |
Common Name | GLYMA_08G037400, LOC100777327 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
CPP |
Protein Properties |
Length: 552aa MW: 59128.6 Da PI: 7.5508 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.08G037400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 42 | 1.8e-13 | 93 | 132 | 2 | 42 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42
++k+CnCk+skClk+YCeCfa+g +C+ C+C +C+N+ e+
Glyma.08G037400.1.p 93 KQKQCNCKHSKCLKLYCECFASGIYCDG-CNCVNCCNNVEN 132
89**************************.********9875 PP
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2 | TCR | 51 | 2.8e-16 | 177 | 216 | 1 | 40 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e
Glyma.08G037400.1.p 177 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 216
589***********************************65 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 552 aa
Download sequence Send
to blast |
MGEGEAEGSD GAPKNVVAND VVANALLPFD VPAKKLARQL DFTGFGGMST TPQPQPPVVL 60 PLRPSTSVRV GKPESPKSRP RPGFEIKEAT PKKQKQCNCK HSKCLKLYCE CFASGIYCDG 120 CNCVNCCNNV ENEAARREAV EATLERNPNA FRPKIASSPH RTRDIREDAG EILILGKHNK 180 GCHCKKSGCL KKYCECFQAN ILCSENCKCM DCKNFEGSEE RQALFHGDQN NNLVYIQQAA 240 NAAITGAIGS SGYSSPPISK KRKGQELLFG PTVKDPSVGR QGQQANNVRV PAPSSSLSPI 300 PGARVGPATL GPSKLMYRSL LADIIQPQHL KELCSVLVLV SGQAAKTFTD QKNLMDKHAE 360 DQTETSRASS TQEQLPSQKE ANVDKAMADD DCSSANQTDN ISLDNSCSDG ADAPKGRPMS 420 PGTLALMCDE QDTMFMTAAS PVGSRAHACN TSLQPPYGQV MTEVYAEQER IVLTKFRDFL 480 NRVITMGEIN ETKCSSLARS ELESQKGPNM NCSGNDSTET AHQQAATNNN INGVAKAAAG 540 NSILFPGSGS S*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Ubiquitous but expressed mostly in flowers. {ECO:0000269|PubMed:18057042}. |
Functional Description ? help
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Source |
Description |
UniProt | Plays a role in development of both male and female reproductive tissues. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015034 | 1e-178 | AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G29000.1 | 1e-164 | Tesmin/TSO1-like CXC domain-containing protein |