PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G205800.1.p
Common NameGLYMA_07G205800, LOC100804756
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 274aa    MW: 29544.7 Da    PI: 7.5894
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G205800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.3e-1277123354
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          ++h+e+ErrRR+riN  +++Lr l+P+      +K++Ka+ L +++  +k+L
  Glyma.07G205800.1.p  77 KNHSEAERRRRERINAHLATLRGLVPST-----EKMDKATLLAEVISQVKEL 123
                          58*************************8.....8**********99988887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.51674123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.7E-977123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-1378127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.46E-1378126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-1180129IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MVYSFYDKTS SSGSDISGLI NPTLNNLGAS NGVSRGGLSS PHSLVFESEK GELVKCPATA  60
KVGKSEICEA KALAALKNHS EAERRRRERI NAHLATLRGL VPSTEKMDKA TLLAEVISQV  120
KELKKNAMEA SKGFLIPMDA DEVKVEPYDD EGGDGSMSYC ATICCDFRSE ILSDLRQTLD  180
SLPLHLVKAE ISTLAGRMKN VFVFTCCKGN INNIDIEKCQ ALASTVHQAL CSVLDKASAT  240
LDFSPRTSHA SKRRRLCFIE TSTSSCNHGS CLC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18287ERRRRE
2251255KRRRL
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.332680.0flower| somatic embryo| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.07G205800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311110.0KT031111.1 Glycine max clone HN_CCL_47 bHLH transcription factor (Glyma07g32690.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003529368.10.0transcription factor bHLH30
RefseqXP_028241145.10.0transcription factor bHLH30-like
TrEMBLI1KLT60.0I1KLT6_SOYBN; Uncharacterized protein
STRINGGLYMA07G32690.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF89863143
Representative plantOGRP37715106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.14e-37bHLH family protein