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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G185300.3.p |
Common Name | GLYMA_07G185300, LOC100799262 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
bHLH |
Protein Properties |
Length: 328aa MW: 36840.7 Da PI: 6.8389 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G185300.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 39 | 1.5e-12 | 151 | 198 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ h ++Er+RR+++ ++f L l+P + +K +Ka++L A++Y+k+Lq
Glyma.07G185300.3.p 151 QDHIIAERKRREKLSQRFIALSALVPGL-----QKTDKASVLGDAIKYLKQLQ 198
5799***********************9.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MEISSIRGLP DDMEIMEDAT FLHQWHLSSI DDPNLLPIAA AFGETLQHHA FSTYPNFNPK 60 TSMETTLADD ERGTKHHRNI SLNPNSKSAQ TSSETQFVSF PNLFSFVDSN HTTPPPDTIS 120 QGTLGNHNNY VFKACQEAKK TGKRYKHSQP QDHIIAERKR REKLSQRFIA LSALVPGLQK 180 TDKASVLGDA IKYLKQLQEK VNALEEEQNM KKNVESVVIV KKCQLSNDVN NSSSEHDGSF 240 DEALPEIEAR FCERSVLIRV HCEKSKGVVE NTIQGIEKLH LKVINSNTMT FGRCALDITV 300 IAQMDMEFCM GVKDLVRNLR SAFTSFM*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5gnj_A | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
5gnj_B | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
5gnj_E | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
5gnj_F | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
5gnj_G | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
5gnj_I | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
5gnj_M | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
5gnj_N | 1e-14 | 149 | 213 | 5 | 69 | Transcription factor MYC2 |
Search in ModeBase |
Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 156 | 161 | ERKRRE |
2 | 157 | 162 | RKRREK |
Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in flowers. {ECO:0000269|PubMed:12679534}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}. |