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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.07G151100.1.p |
Common Name | GLYMA_07G151100, LOC100778195 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
Trihelix |
Protein Properties |
Length: 292aa MW: 35078.4 Da PI: 7.591 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.07G151100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 80 | 3.5e-25 | 49 | 131 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W+ qe+++ + +r e+++++ ++k++k+lWe +s +m+e+gf++s++qCk+kw+nl +ryk ++++e + +++++p++++l+
Glyma.07G151100.1.p 49 QWSIQETKEFLMIRAELDQTFMDTKRNKQLWEVISTRMKEKGFHKSAEQCKCKWKNLVTRYKGCETMEPEA---TRQQFPFYNELQ 131
7********************************************************************96...45679*****98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MEGHHLHHHH RQQQQQHHHQ QQHQQQQHHH HPHHNITTSN VDATDRFPQW SIQETKEFLM 60 IRAELDQTFM DTKRNKQLWE VISTRMKEKG FHKSAEQCKC KWKNLVTRYK GCETMEPEAT 120 RQQFPFYNEL QAIFAARMQR MLWAEAEGGS NKKKVHLSSE DEEEGNEETS EGDHKGNITS 180 KKKKKGKMVI GGGGSGNNNL ESLKEIMDEF MRQQMQMEAQ WMEAFEAREN ERRLKEMEWR 240 QTMEALENER LMMDQRWRER EEQRRIREEV RADKRDALIT ALLNKLRREE M*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in roots and flower buds. {ECO:0000269|PubMed:15044016}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that binds specifically to the core DNA sequence 5'-GTTAC-3'. {ECO:0000269|PubMed:15044016}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 1e-144 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |