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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.07G073000.2.p |
| Common Name | GLYMA_07G073000, LOC100788528 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
MYB |
| Protein Properties |
Length: 275aa MW: 30982 Da PI: 8.2978 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.07G073000.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 52.4 | 1.2e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEde+lv+++++ Gg+ +W++ ++ g+ R++k+c++rw +yl
Glyma.07G073000.2.p 14 KGSWTAEEDEILVNYINKNGGHgSWRSLPKLAGLLRCGKSCRLRWTNYL 62
799******************9***********99************97 PP
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| 2 | Myb_DNA-binding | 48.8 | 1.6e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T eE++l+++++ lG++ W++Ia+ ++ gRt++++k+ w+++l
Glyma.07G073000.2.p 68 RGSFTLEEEKLIIQLHGILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 113
89********************.*********.************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MGRKPCCDKM GLKKGSWTAE EDEILVNYIN KNGGHGSWRS LPKLAGLLRC GKSCRLRWTN 60
YLRPDIKRGS FTLEEEKLII QLHGILGNRW AAIASQLPGR TDNEIKNLWN THLKKRLICM 120
GLDPQTHQPL ASPHNLNDKA HASSTSTRHM AQWETARLEA EARLSREPHF NNKTDSDYFL 180
RIWNSEVGES FRDVHKSESS IKCESLSATT TTTTTDLASS TPASIVKKEF LWGVKKIVSY 240
SSSSSSELEH DSCDTSLQFL LDFPINNDMS FLEL*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed in cotyledon and hypocotyls of germinating seeds. {ECO:0000269|PubMed:19232308}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in the shoot apex, young flower buds, developing carpels and siliques (PubMed:19232308). Expressed in floral meristem, initiating floral primordia and developing flowers (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that may play a role in flower development by repressing ANT (PubMed:19232308). Regulates the transition of meristem identity from vegetative growth to flowering. Acts downstream of LFY and upstream of AP1. Directly activates AP1 to promote floral fate. Together with LFY and AP1 may constitute a regulatory network that contributes to an abrupt and robust meristem identity transition (PubMed:21750030). {ECO:0000269|PubMed:19232308, ECO:0000269|PubMed:21750030}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015042 | 1e-100 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |
