PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja

Family

bZIP

Protein Properties

Length: 353aa MW: 37711.6 Da PI: 7.54

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Glyma.07G060400.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	68.7	9.7e-22	207	269	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN +Lk+e+ +l++ ++++++e+ Glyma.07G060400.3.p 207 ERELKRERRKQSNRESARRSRLRKQAETEELARKVDMLTAENVSLKSEIIQLTEGSEQMRMEN 269 89**********************************************************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF16596	2.3E-23	58	186	No hit	No description
Gene3D	G3DSA:1.20.5.170	7.0E-15	203	266	No hit	No description
Pfam	PF00170	3.2E-21	207	269	IPR004827	Basic-leucine zipper domain
SMART	SM00338	5.4E-21	207	271	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	12.806	209	272	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.75E-11	210	265	No hit	No description
CDD	cd14702	1.31E-17	212	260	No hit	No description
PROSITE pattern	PS00036	0	214	229	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MMPPYGPPYA AFYSHGGVYT HPAVAIGPHL HGQGVSSSPA VGTHSSIESP TKLSGNTDQG 60 LMKKSKGFDG LAMSIGNCNA ESAEHGAENR QSQSVDTEGY SDGSDGNTAG ANQTKRKRCR 120 EGTLTTDGEG KTELQNGPAS KETSSSKKIV SATPASVAGT LVGPVVSSVM ATTLELRNPS 180 TVDSKANSTS APQPCAIVPN ETCLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK 240 VDMLTAENVS LKSEIIQLTE GSEQMRMENS ALREKLRNTQ LGQREEIILS SIESKRAAPV 300 STENLLSRVN NSSSNDRTTE NENDFCENKP NSGAKLHQLL DTNPRADAVA AG*

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MMPPYGPPYA AFYSHGGVYT HPAVAIGPHL HGQGVSSSPA VGTHSSIESP TKLSGNTDQG  60
LMKKSKGFDG LAMSIGNCNA ESAEHGAENR QSQSVDTEGY SDGSDGNTAG ANQTKRKRCR  120
EGTLTTDGEG KTELQNGPAS KETSSSKKIV SATPASVAGT LVGPVVSSVM ATTLELRNPS  180
TVDSKANSTS APQPCAIVPN ETCLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK  240
VDMLTAENVS LKSEIIQLTE GSEQMRMENS ALREKLRNTQ LGQREEIILS SIESKRAAPV  300
STENLLSRVN NSSSNDRTTE NENDFCENKP NSGAKLHQLL DTNPRADAVA AG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	229	RRSRLRK
2	223	230	RRSRLRKQ

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Gma.60043	0.0	epicotyl\| root\| seed coat

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Glyma.07G060400.3.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KT031141	0.0	KT031141.1 Glycine max clone HN_CCL_141 BZIP transcription factor (Glyma16g03190.1) mRNA, partial cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014633245.1	0.0	transcriptional activator TAF-1 isoform X2
Refseq	XP_028239451.1	0.0	transcriptional activator TAF-1-like isoform X2
TrEMBL	A0A0R0IZQ8	0.0	A0A0R0IZQ8_SOYBN; Uncharacterized protein
STRING	GLYMA07G06620.2	0.0	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	6e-84	G-box binding factor 3

Link Out ? help Back to Top
Phytozome	Glyma.07G060400.3.p
Entrez Gene	100820423

Publications ? help Back to Top
Liao Y, et al. Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis. Planta, 2008. 228(2): p. 225-40 [PMID:18365246]