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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.07G042800.1.p |
| Common Name | GLYMA_07G042800, LOC100812599 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
Trihelix |
| Protein Properties |
Length: 369aa MW: 39856.5 Da PI: 10.3244 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.07G042800.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 48.3 | 2.7e-15 | 70 | 156 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++ + +Li+a e+ +l+rg+lk+++W+ev++ + ++ ++ +qCk++++ ++k+yk +k+ + ++s++p++d+le
Glyma.07G042800.1.p 70 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVsvreDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAG---ATSKWPFYDRLE 156
7*************************************85444445556778******************99986...6779******98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 369 aa
Download sequence Send
to blast |
MDDDDEIQSH PSPASGSPPS SPRANGRITV TVAAPAPPPP PNSLALALPI QQPAKGNGGG 60
GGGGGGREDC WSEGATAVLI DAWGERYLEL SRGNLKQKHW KEVADIVSVR EDYTKAPKTD 120
IQCKNRIDTV KKKYKSEKAK IAAGATSKWP FYDRLEQLIG PSAKIPGVGG ASGTSAAGNS 180
NLQPQKVPLG IPVGVRGGAN QFNHPHKQPQ PVPLKNQKIQ FRRRGPPVES DSEERDASSP 240
ASSDSFPPES FERKRPRLMS SNTTKGSGER RKAKGWGSAV RELTQAILKF GEAYEQAESS 300
KLQQVVEMEK QRMKFAKDLE LQRMQFFMKT QVEISQLKLG RKGGNPSNNH HGTTNNNNSN 360
HNNNSGSE*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015042 | 0.0 | AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G14180.1 | 1e-46 | sequence-specific DNA binding transcription factors |
