PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G284900.1.p
Common NameGLYMA_06G284900
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bZIP
Protein Properties Length: 341aa    MW: 38231 Da    PI: 6.1945
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G284900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.8e-11206249548
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                          kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  Glyma.06G284900.1.p 206 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 249
                          899*********************************98777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.8E-14202266IPR004827Basic-leucine zipper domain
PfamPF077162.8E-9203251IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.622204256IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.3E-13206257No hitNo description
SuperFamilySSF579592.89E-11206260No hitNo description
CDDcd147037.24E-22207257No hitNo description
PROSITE patternPS000360209224IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MAQLPPKIPN MTPNWPDFSS PHQKMPSLKT MSPNQNPSWV DEFLEFSAAR RGAHRRSVSD  60
SITFLEAPLL DHHHCKGGSV GGGGGSGDNE FERFDDEQFM SMFSDEASGN NNNNNNNNNN  120
NNNTMMENAL SSSNPSTPSD HNSINDEKEM NNKEEEGKKQ VKNESEEDED ESQCKQEITQ  180
LPNNDDSKNN SNANATCSSE KITDPKRVKR ILANRQSAQR SRVRKLQYIS ELERSVTSLQ  240
AEVSVLSPRV AFLDHQRLLL NVDNSALKQR IAALAQDKIF KDAHQEALKR EIERLRQVYH  300
QQNIKKMDNA AGSPPSQSPP SPSPKPRCET HTEKEQLINV *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.278830.0cotyledon| flower| hypocotyl| leaf| root
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G284900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0969001e-112BT096900.1 Soybean clone JCVI-FLGm-25J24 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001335877.10.0bZIP transcription factor bZIP50
SwissprotQ9M2K41e-120BZP61_ARATH; Basic leucine zipper 61
TrEMBLI1KEU60.0I1KEU6_SOYBN; Uncharacterized protein
STRINGGLYMA06G43760.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-112bZIP family protein
Publications ? help Back to Top
  1. Liao Y, et al.
    Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis.
    Planta, 2008. 228(2): p. 225-40
    [PMID:18365246]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]