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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Glyma.06G265500.1.p |
| Common Name | GLYMA_06G265500, LOC100775665 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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| Family |
GRAS |
| Protein Properties |
Length: 569aa MW: 63053 Da PI: 5.9667 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G265500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 426.2 | 2.6e-130 | 198 | 567 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
l++lL+ cA+a+s+++++ ++l+++ + +s +g+p+qRl ay++e+L ar s++++y+al+++e + ++ l++++l++e++P+
Glyma.06G265500.1.p 198 LKQLLIVCAKALSENNMKGFDQLIEKARSAVSITGEPIQRLGAYLVEGLVARKEASGNNIYHALRCREPE---GKDLLSYMQLLYEICPY 284
679******************************************************************9...9**************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfef 178
lkf++++aN aI ea +e+ +HiiDf+i+qG+QW++LlqaLa+Rp+g+p++RiTg++++ s+ + + le++g+rLa + +++++p+ef
Glyma.06G265500.1.p 285 LKFGYMAANGAIAEACRNEDLIHIIDFQIGQGTQWMTLLQALAARPGGAPHVRITGIDDQLSKyvRGDGLEAVGKRLAAISQTFNIPVEF 374
***********************************************************877789************************* PP
GRAS 179 nvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalf 268
+ v d++ ++L+v+pgEalaVn+ lqlh++ desv+++++rd +L+lvkslsPkv ++veqe+++n+++F++rf+e+l+yy a+f
Glyma.06G265500.1.p 375 HG-VPVLAPDVTKDMLDVRPGEALAVNFPLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIF 463
**.67788999******************************************************************************* PP
GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
+s++++lpr+s+er++vE+++l+r+ivn++aceg+er+erhe l+kW++rl++aGF+++pls+++++ +++llr ++ + y++ e++g++
Glyma.06G265500.1.p 464 ESIDVSLPRKSKERVNVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYS-EHYNLVEKDGAM 552
*************************************************************************9999.66********** PP
GRAS 359 vlgWkdrpLvsvSaW 373
+lgWkdr+L+s+SaW
Glyma.06G265500.1.p 553 LLGWKDRNLISASAW 567
*************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 569 aa
Download sequence Send
to blast |
MDLNQFSSFN VISSAGFPCA SSCTPISPIS NRLLGSLKLD IGNSPNSALS THFDSDTVSS 60
ALSDSQEQHN CGEIHSGVNS CNSLQESNHY LHRPVSSVDH LEDGLHLSTR SFFPQDASYD 120
HETRHALLEL ETSLMAPDDE DQVTTSSTSL GDSSRPTASD QRNRSWSHEG QSSDVAYVEK 180
RHKSMEEALL QGFPSSNLKQ LLIVCAKALS ENNMKGFDQL IEKARSAVSI TGEPIQRLGA 240
YLVEGLVARK EASGNNIYHA LRCREPEGKD LLSYMQLLYE ICPYLKFGYM AANGAIAEAC 300
RNEDLIHIID FQIGQGTQWM TLLQALAARP GGAPHVRITG IDDQLSKYVR GDGLEAVGKR 360
LAAISQTFNI PVEFHGVPVL APDVTKDMLD VRPGEALAVN FPLQLHHTAD ESVDMSNPRD 420
GLLRLVKSLS PKVTTLVEQE SNTNTTPFFN RFIETLDYYL AIFESIDVSL PRKSKERVNV 480
EQHCLARDIV NIIACEGKER VERHELLGKW KSRLTMAGFR QYPLSSYVNS VIRSLLRCYS 540
EHYNLVEKDG AMLLGWKDRN LISASAWH*
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| Functional Description ? help
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| Source |
Description |
| UniProt | May play a regulatory role in the early step of oligosaccharide elicitor response, downstream of the membrane-associated high-affinity chitin-binding protein. {ECO:0000269|PubMed:12591613}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By oligosaccharide elicitor (N-Acetylchitooligosaccharide) extracted from the rice blast fungus (M.grisea) cell wall. Strongest induction by chitin oligomer with greater degree of polymerization (heptamer). By inoculation of M.grisea in rice cell suspension culture. {ECO:0000269|PubMed:12591613}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015039 | 0.0 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
