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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G210600.1.p |
Common Name | GLYMA_06G210600, LOC100798555 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TCP |
Protein Properties |
Length: 397aa MW: 46010.9 Da PI: 6.3859 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G210600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 131.4 | 8.6e-41 | 125 | 286 | 2 | 136 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssas 71
+gk+drhski T++g+RdRR+Rls+e+a+rfF Lqd+L fdk+skt+eWLl+qak +i l++ +ss++s
Glyma.06G210600.1.p 125 PGKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLNFDKASKTVEWLLNQAKVEINRLVKEkqkqqqqkkkeendhhyyqsCSSASS 214
689*************************************************************77666666666555555555444444 PP
TCP 72 ec......eaesssssasnsssg..............kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136
ec + +k + + k++++ +++ lake r++ar+rarertrekmr++ +l
Glyma.06G210600.1.p 215 ECdqegvsC-------------LdevvvsgdqeqqqeRVEKVVKRKVKNSRKISAFDPLAKECRERARERARERTREKMRNRGVL 286
554444432.............03333333333333344444445666666777799999*********************9765 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MQSQSSDTFP SHNRNDPISY YDPAFYYYNS RPFFIDSESN PTSKQENNNN NCDLVPSPPP 60 PLSFFHFPSP TFEDTQNQIF LEQRHDFLLQ FYHQPLPQDP EPQPVITTMD LSVKKSDQIQ 120 RKRVPGKRDR HSKINTARGL RDRRMRLSLE VAKRFFGLQD MLNFDKASKT VEWLLNQAKV 180 EINRLVKEKQ KQQQQKKKEE NDHHYYQSCS SASSECDQEG VSCLDEVVVS GDQEQQQERV 240 EKVVKRKVKN SRKISAFDPL AKECRERARE RARERTREKM RNRGVLAEES KQCGEETNQD 300 LIQLGSWNPF ETGDQESAGA KRTTTHSVAE HPSSLDVITI EAKEQSYHAA KEHDDDDDDS 360 LVVLSKWSPS LIFNNYGFSQ DHQFAEFQSL GKLWEA*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 266 | 278 | RARERARERTREK |