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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G209000.5.p |
Common Name | GLYMA_06G209000 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
NF-YB |
Protein Properties |
Length: 153aa MW: 17255.7 Da PI: 5.237 |
Description |
NF-YB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G209000.5.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YB | 62.7 | 7.9e-20 | 11 | 80 | 3 | 72 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwala 72
++d+ lP a +++i+k++lP + ++++da++++ ec +efi +v+se+++ c++e+r+ti+++ +l al+
Glyma.06G209000.5.p 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNKEERRTIAPEHVLKALG 80
6899**************************************************************9997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 153 aa
Download sequence Send
to blast |
MEPMDIVGKA KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESNE 60 VCNKEERRTI APEHVLKALG VFLKLLNCCI AKVFMQIRSN LCLINYVISS LKCCFLFCIL 120 NFNFYLVSFY VSLLSICEVP VILEIFFFCV AL*
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Expression -- UniGene
? help Back to Top |
UniGene ID |
E-value |
Expressed in |
Gma.4205 | 1e-125 | cotyledon| flower| hypocotyl| leaf| meristem| pod| root| seed coat| stem |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF464906 | 1e-132 | AF464906.1 Glycine max repressor protein (Dr1) mRNA, complete cds. |
GenBank | BT089816 | 1e-132 | BT089816.1 Soybean clone JCVI-FLGm-2L20 unknown mRNA. |