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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G204300.1.p |
Common Name | GLYMA_06G204300, LOC100804574 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
TCP |
Protein Properties |
Length: 391aa MW: 43113.1 Da PI: 9.6905 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G204300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 90.6 | 3.4e-28 | 55 | 143 | 3 | 83 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......ssssasec..eaesssssas 83
g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WLl++ k i++l+ + ++ ++ ++ ++ss+as
Glyma.06G204300.1.p 55 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLSQPSKVIDWLLEATKFDIDKLPPLqfpqgfgQFHHHPQTlfP-FHESSAAS 143
79*************************************************************555555522222222321.11111111 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 391 aa
Download sequence Send
to blast |
MMLTMMASSR EGYQAKQEGD TTTNIDKFSK ASSTTSRQWS AFRNPRIVRV SRSFGGKDRH 60 SKVCTIRGLR DRRIRLSVPT AIQLYDLQDK LGLSQPSKVI DWLLEATKFD IDKLPPLQFP 120 QGFGQFHHHP QTLFPFHESS AASHQLSLGP FSDASSTFVR DGGIQNLMAK SRYWENINSM 180 SRLRGNKEAE KGKWIKTSEE ENHDQDGVVG GYNNLQVSTQ RLFPMGSSTT TTTHSLLPGL 240 LNNSMPYNAY SSEPSSLSLS QFGSHGLFPS QQVDPNPSSG NNGVQFQSSL SLPSSGSQLL 300 FGSSSATPSM FTTYAPFIAP SVDPDPRQFN HIHQFLNSGS QILPPHPLIP SLHHPFNSQI 360 RPFPAALFSS KLLDSDSSNH SQQDHKGSTS *
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G60970.1 | 2e-55 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 |