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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Glyma.06G190200.1.p |
| Common Name | GLYMA_06G190200 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 327aa MW: 36832.5 Da PI: 4.4454 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Glyma.06G190200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 56.6 | 4.5e-18 | 91 | 144 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq++ Le+ F +++++ e++ LAk+lgL+ rqV +WFqNrRa++k
Glyma.06G190200.1.p 91 KKRRLSVEQVKFLEKSFDEENKLEPERKIWLAKELGLQPRQVAIWFQNRRARWK 144
56689************************************************9 PP
|
| 2 | HD-ZIP_I/II | 127.6 | 5.1e-41 | 90 | 182 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
ekkrrls eqvk+LE+sF+ee+kLeperK la+eLglqprqva+WFqnrRAR+ktkq+Ekdy++L+++y+ lk++ ++L +e+++L++e
Glyma.06G190200.1.p 90 EKKRRLSVEQVKFLEKSFDEENKLEPERKIWLAKELGLQPRQVAIWFQNRRARWKTKQMEKDYDSLQASYNDLKANYDNLLREKDKLKAE 179
69**************************************************************************************99 PP
HD-ZIP_I/II 91 lke 93
+++
Glyma.06G190200.1.p 180 VAR 182
875 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MAAGTVFCAA ATAASNLTTT TFLHNQTPPS TSSQPPLDSL FLSASSPFLG SRSIVSFGDV 60
QGGKGCNDSF FRPYDENGDE DMDEYFHQPE KKRRLSVEQV KFLEKSFDEE NKLEPERKIW 120
LAKELGLQPR QVAIWFQNRR ARWKTKQMEK DYDSLQASYN DLKANYDNLL REKDKLKAEV 180
ARLTEKVLGR EKNESHLEQA ETNGLQEPLH KSLVDSASEG EGSKVTFEAC KQEDISSAKS 240
DIFDSSESPQ YTDGVHSALL ETGDSSYVFE PDRSDVSQDE EDNLSKTLLP HYIFPKLEDV 300
DYSDPPHGSC NFGIPEEDQA IWSWPY*
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| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 138 | 146 | RRARWKTKQ |
| Expression -- UniGene
? help Back to Top |
| UniGene ID |
E-value |
Expressed in |
| Gma.31006 | 0.0 | cotyledon| flower| hypocotyl| leaf| meristem| root| seed coat| stem |
