PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.06G165700.2.p
Common NameGLYMA_06G165700
Organism
Glycine max
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 321aa    MW: 35866.2 Da    PI: 7.978
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.06G165700.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.7e-09174221455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Glyma.06G165700.2.p 174 SHSLAERVRREKISERMKVLQRLVPGC----DKVTGKALMLDEIINYVQSLQ 221
                          8*************************9....555*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.93E-17168237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.04E-10168225No hitNo description
PROSITE profilePS5088815.79170220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-16170235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-6174221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.2E-10176226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MAAFSYQYHP FLVDPAFFPN NLNTPNSPPP PLPSQFQQLP HETSSFNVTN QETSCVDQSS  60
KITISDNEPS VTKNLSPQSS MVVDKLETGE QVTQKVNIPV DKKRRTRNGS SFTSNPQSKD  120
TATEGKNKKQ RKNNGGLKEE DKAKEEKKDQ RKCPEEPPTG YIHVRARRGQ ATDSHSLAER  180
VRREKISERM KVLQRLVPGC DKVTGKALML DEIINYVQSL QNQVEFLSMK LASVNPMFYD  240
LATDLDTLLV RPEKLNSMAS PSPLPSMSHC NSPNNQATTF ADTTTMTPTN IFHTTSDYLL  300
DNSVSFFLQG QRPNVLSEEV *
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Gma.333880.0cotyledon| leaf
Cis-element ? help Back to Top
SourceLink
PlantRegMapGlyma.06G165700.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311070.0KT031107.1 Glycine max clone HN_CCL_82 bHLH transcription factor (Glyma06g17420.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003526933.20.0transcription factor bHLH137
RefseqXP_028236742.10.0transcription factor bHLH137-like
TrEMBLK7KVH00.0K7KVH0_SOYBN; Uncharacterized protein
STRINGGLYMA06G17420.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.29e-55bHLH family protein