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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Glyma.06G121300.2.p |
Common Name | GLYMA_06G121300, LOC100798897 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
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Family |
GRAS |
Protein Properties |
Length: 601aa MW: 66778.7 Da PI: 4.5611 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Glyma.06G121300.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 453.4 | 1.5e-138 | 228 | 597 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92
+lL+ecA a+s+g+ + ++++++l++++s +g+p qR+aay++e+Laarla+s++++ykal+++e + +s++laa+++++ev+P++k
Glyma.06G121300.2.p 228 KLLYECAIALSEGNEVEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPP---TSDRLAAMQILFEVCPCFK 314
79*****************************************************************9...9****************** PP
GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
f++++aN+aI eav+ + ++HiiDfdi+qG Q+++L+q+LasR+++pp++R+Tgv++pes+ s l+++g+rL+k+Ae+lg+pfef++
Glyma.06G121300.2.p 315 FGFIAANNAITEAVKDDMKIHIIDFDINQGSQYINLIQTLASRSSKPPHVRLTGVDDPESVqrSVGGLRNIGQRLEKLAEALGLPFEFRA 404
***********************************************************9999999************************ PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
va+r++ +++++L+++p+Eal+Vn+++qlh+++desvs+ +erd++L+lvksl+Pk+v+vveq++++n+++Fl rf+ea +yysa+f+s
Glyma.06G121300.2.p 405 -VASRTSIVTPSMLNCSPDEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLNPKLVTVVEQDVNTNTTPFLPRFVEAYNYYSAVFES 493
.7**************************************************************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvl 360
l+a+lpres++r++vEr++l+r+ivnvvaceg++r+er e ++kWr+r+++aGF++ p+s++++++++ l+++v+ d y+++ee g+l +
Glyma.06G121300.2.p 494 LDATLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRKLIKTVYCDRYKIKEEMGALHF 583
***************************************************************************888************ PP
GRAS 361 gWkdrpLvsvSaWr 374
gW+d++L+++SaW+
Glyma.06G121300.2.p 584 GWEDKNLIVASAWK 597
*************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 601 aa
Download sequence Send
to blast |
MSLVRSADLA PTSYENAKLF SLKGTDVRPG LSSQIFDPDK HRSMYMTDAY SGEGYEKYFH 60 DSQTEELIEP SSSSISGSSI HPDVASSYQL RASSGASMVA NNPSDSSFMS TRHHDAYQSN 120 SGSDLMENGS LDSRDDEGLM RLRLKALERA LLDDSDAGED EEEEEEEEED IFEAAQSMEI 180 DPDIAEWADS MHNMLLHGSP KESSSSDSNT SSISSTKEIS QTSQTPKKLL YECAIALSEG 240 NEVEGSSMIN NLRQMVSIQG EPSQRIAAYM VEGLAARLAE SGKSIYKALR CKEPPTSDRL 300 AAMQILFEVC PCFKFGFIAA NNAITEAVKD DMKIHIIDFD INQGSQYINL IQTLASRSSK 360 PPHVRLTGVD DPESVQRSVG GLRNIGQRLE KLAEALGLPF EFRAVASRTS IVTPSMLNCS 420 PDEALVVNFA FQLHHMPDES VSTVNERDQL LRLVKSLNPK LVTVVEQDVN TNTTPFLPRF 480 VEAYNYYSAV FESLDATLPR ESQDRMNVER QCLARDIVNV VACEGEDRIE RYEVAGKWRA 540 RMTMAGFTSS PMSTNVTDEI RKLIKTVYCD RYKIKEEMGA LHFGWEDKNL IVASAWKLPR 600 *
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, shoots, leaves, flowers and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 0.0 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |